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hypothetical_protein_psal_cds_1384
Euk-VirPandoravirus_salinus
hypothetical_protein_psal_cds_1384__YP_008438875__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_008438875 ↗
- Protein ID:
- hypothetical_protein_psal_cds_1384
- Kingdom:
- euk
Quality
73.8
mean pLDDT
Cluster
View cluster (11 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 51-126
D2
medium
residues 142-295
D3
medium
residues 296-354
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1siyA00 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.62 | 52.0 | 4.64e-01 | 100.0% | 81.3% |
| 2i2xB01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.60 | 49.0 | 4.22e-01 | 94.9% | 77.0% |
| 3waeA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.55 | 47.0 | 3.51e-01 | 98.3% | 45.3% |
| 1mswD04 | 1.10.287.280 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 37.0 | 3.47e-01 | 76.3% | 62.8% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3813736 | 185.1.1.0 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 0.66 | 56.0 | 5.50e-01 | 100.0% | 90.8% |
| 3836210 | 185.1.1.1 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Tryp_alpha_amyl | 0.65 | 54.0 | 5.21e-01 | 100.0% | 87.1% |
| 3819331 | 185.1.1.2 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › LTP_2 | 0.65 | 54.0 | 4.91e-01 | 94.9% | 87.5% |
| 5061410 | 4133.1.1.0 ↗ | alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like | 0.62 | 50.0 | 4.87e-01 | 96.6% | 95.7% |
| 5005176 | 604.15.1.0 ↗ | alpha bundles › Spectrin repeat-like › Efb C-domain-like › Efb C-domain-like | 0.60 | 47.0 | 4.58e-01 | 89.8% | 100.0% |
| 3826736 | 185.1.1.0 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 0.59 | 45.0 | 4.58e-01 | 91.5% | 89.8% |
| 5072863 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.54 | 45.0 | 3.25e-01 | 96.6% | 81.1% |
D4
medium
residues 355-519
Domain cluster:
rep: ankyrin_repeat_protein__YP_009119006__Pandoravirus_inopinatum__1605721__D167-333
D5
medium
residues 520-617