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hypothetical_protein_psal_cds_1385

Euk-Vir

Pandoravirus_salinus

hypothetical_protein_psal_cds_1385__YP_009430152__Pandoravirus_salinus__1349410

Identity

Accession:
YP_009430152 ↗
Protein ID:
hypothetical_protein_psal_cds_1385
Kingdom:
euk

Quality

72.9 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-52
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1uouA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.51 38.0 3.57e-01 89.4% 85.3%
2dsjA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.51 40.0 3.75e-01 100.0% 85.1%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3685791 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 66.0 6.40e-01 100.0% 85.5%
3730335 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.76 63.0 6.30e-01 100.0% 94.0%
3712177 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 54.0 3.37e-01 100.0% 24.6%
5041226 604.16.1.0 ↗ alpha bundles › Spectrin repeat-like › Hypothetical membrane protein Ta0354, soluble domain › Hypothetical membrane protein Ta0354, soluble domain 0.61 49.0 4.51e-01 95.7% 76.9%
4031223 2008.1.1.204 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF2800 0.51 41.0 2.67e-01 95.7% 22.8%
D2 medium residues 58-123
PDB
Domain cluster: rep: hypothetical_protein_pqer_cds_1155__YP_009483846__Pandoravirus_quercus__2107709__D57-120
D3 medium residues 124-269
PDB
Domain cluster: rep: hypothetical_protein_pqer_cds_1155__YP_009483846__Pandoravirus_quercus__2107709__D148-276
D4 medium residues 270-344
PDB
Domain cluster: rep: hypothetical_protein_psal_cds_1384__YP_008438875__Pandoravirus_salinus__1349410__D296-354
D5 medium residues 345-474
PDB
D6 medium residues 475-612
PDB
Domain cluster: rep: hypothetical_protein_pdul_cds_1036__YP_008319978__Pandoravirus_dulcis__1349409__D503-605