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hypothetical_protein_psal_cds_139
Euk-VirPandoravirus_salinus
hypothetical_protein_psal_cds_139__YP_008436663__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_008436663 ↗
- Protein ID:
- hypothetical_protein_psal_cds_139
- Kingdom:
- euk
Quality
76.5
mean pLDDT
Cluster
View cluster (18 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 40-113
Domain cluster:
rep: MoaE_superfamily_incomplete_domain__YP_008438746__Pandoravirus_salinus__1349410__D11-84
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19255.5 best | DUF5902 | 77.6 | 1.10e-21 | 100.0% | 66.3% |
D2
high
residues 118-136_153-272
Domain cluster:
rep: hypothetical_protein_TW95_gp0054__YP_009119023__Pandoravirus_inopinatum__1605721__D223-356
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tbxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 34.0 | 4.12e-01 | 97.1% | 77.8% |
| 3l9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 38.0 | 4.59e-01 | 100.0% | 91.0% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 38.0 | 4.13e-01 | 99.3% | 71.3% |
| 4nb5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 31.0 | 3.76e-01 | 95.0% | 76.5% |
| 8agaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 33.0 | 3.50e-01 | 100.0% | 57.9% |
| 3zmdA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 34.0 | 3.37e-01 | 100.0% | 51.4% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 35.0 | 3.97e-01 | 100.0% | 76.2% |
| 1yyvB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 33.0 | 3.67e-01 | 100.0% | 67.0% |
| 1ub9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 34.0 | 3.88e-01 | 100.0% | 76.0% |
| 2mj6A00 | 3.30.450.250 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.59 | 24.0 | 2.97e-01 | 84.2% | 57.8% |
| 1p4xA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 34.0 | 3.63e-01 | 100.0% | 63.4% |
| 1p4xA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 34.0 | 3.57e-01 | 100.0% | 61.4% |
| 2nyxB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 34.0 | 3.38e-01 | 100.0% | 53.5% |
| 4g9yA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 32.0 | 3.26e-01 | 100.0% | 55.9% |
| 3aafA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 38.0 | 4.22e-01 | 100.0% | 93.6% |
| 1dp7P00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 30.0 | 3.76e-01 | 92.8% | 98.7% |
| 2hqyA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 31.0 | 3.21e-01 | 92.1% | 63.8% |
| 3zcoA00 | 1.10.10.2450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.51 | 37.0 | 3.88e-01 | 97.8% | 83.5% |
| 7dvrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 30.0 | 3.01e-01 | 81.3% | 54.6% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4947811 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 35.0 | 3.83e-01 | 98.6% | 63.5% |
| 3962221 | 101.1.2.78 ↗ | alpha arrays › HTH › HTH › winged helix domain › AlkZ-like | 0.63 | 31.0 | 4.05e-01 | 93.5% | 85.3% |
| 4032197 | 101.1.2.231 ↗ | alpha arrays › HTH › HTH › winged helix domain › Staph_reg_Sar_Rot | 0.63 | 37.0 | 4.03e-01 | 100.0% | 69.6% |
| 5064203 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 36.0 | 4.30e-01 | 100.0% | 85.6% |
| 5052010 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 35.0 | 4.42e-01 | 97.8% | 93.8% |
| 4968342 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 32.0 | 3.64e-01 | 95.0% | 63.8% |
| 5076041 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 34.0 | 3.65e-01 | 98.6% | 60.8% |
| 5013440 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 35.0 | 3.55e-01 | 99.3% | 55.0% |
| 4978596 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.61 | 37.0 | 3.92e-01 | 100.0% | 67.2% |
| 5051882 | 101.1.2.143 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_34 | 0.61 | 35.0 | 3.85e-01 | 100.0% | 70.0% |
| 4949577 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 37.0 | 4.30e-01 | 100.0% | 87.4% |
| 5045315 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 39.0 | 4.22e-01 | 100.0% | 77.4% |
| 4033346 | 101.1.2.231 ↗ | alpha arrays › HTH › HTH › winged helix domain › Staph_reg_Sar_Rot | 0.60 | 35.0 | 4.04e-01 | 100.0% | 81.1% |
| 2588 | 101.1.2.143 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_34 | 0.59 | 34.0 | 3.88e-01 | 100.0% | 76.0% |
| 3599153 | 3609.1.1.0 ↗ | alpha arrays › DNA repair protein RAD4 beta-hairpin domain › DNA repair protein RAD4 beta-hairpin domain › DNA repair protein RAD4 beta-hairpin domain | 0.59 | 25.0 | 3.11e-01 | 70.5% | 60.0% |
| 4934352 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.59 | 36.0 | 3.35e-01 | 100.0% | 47.4% |
| 4945099 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 36.0 | 3.79e-01 | 100.0% | 66.4% |
| 5075009 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 35.0 | 4.03e-01 | 100.0% | 84.2% |
| 3987775 | 101.1.2.453 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_DnaB | 0.58 | 33.0 | 2.78e-01 | 100.0% | 32.2% |
| 5028313 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.58 | 31.0 | 3.93e-01 | 97.1% | 88.7% |
| 4991432 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 31.0 | 3.43e-01 | 97.8% | 62.7% |
| 3667879 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.57 | 37.0 | 4.12e-01 | 100.0% | 84.8% |
| 5003128 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 33.0 | 3.75e-01 | 97.8% | 77.0% |
| 5080644 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 31.0 | 3.95e-01 | 92.8% | 97.3% |
| 4130677 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.56 | 23.0 | 3.19e-01 | 71.2% | 74.3% |
| 3642660 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.56 | 35.0 | 3.46e-01 | 97.8% | 56.8% |
| 4959713 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.53 | 33.0 | 3.65e-01 | 100.0% | 77.8% |
| 4999898 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.53 | 31.0 | 3.68e-01 | 97.8% | 86.7% |
| 4966180 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 40.0 | 4.05e-01 | 100.0% | 80.0% |
| 4193699 | 306.4.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › YggU-like › YggU-like › DUF167 | 0.51 | 31.0 | 3.58e-01 | 88.5% | 83.0% |
| 235960 | 101.1.2.229 ↗ | alpha arrays › HTH › HTH › winged helix domain › SIR3_C | 0.51 | 37.0 | 3.88e-01 | 97.8% | 83.5% |