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hypothetical_protein_psal_cds_167

Euk-Vir

Pandoravirus_salinus

hypothetical_protein_psal_cds_167__YP_008436714__Pandoravirus_salinus__1349410

Identity

Accession:: YP_008436714 ↗
Protein ID:: hypothetical_protein_psal_cds_167
Kingdom:: euk

Quality

72.2 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

View cluster (25 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 74-209

PDB

Domain cluster: rep: IMGVR_UViG_3300006894_000039-3300006894-Ga0079215_1000005620__D114-216

D2 medium residues 210-313

PDB

Domain cluster: representative

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2nn4A00	1.10.287.760	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like	0.68	41.0	5.15e-01	76.9%	100.0%
3n2oA03	1.20.58.930	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.61	43.0	4.52e-01	77.9%	80.2%
3fnbA01	1.20.1440.110	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase	0.61	42.0	4.10e-01	76.9%	64.9%
4uurA00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.60	43.0	4.09e-01	75.0%	96.8%
1sr2A00	1.20.120.160	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain	0.59	39.0	3.82e-01	94.2%	61.2%
1ux8A00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.58	41.0	4.02e-01	75.0%	97.5%
1tqgA00	1.20.120.160	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain	0.58	42.0	4.27e-01	98.1%	75.2%
2odmA00	1.10.287.750	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like	0.58	41.0	4.60e-01	95.2%	98.7%
2uubT00	1.20.58.110	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20	0.57	43.0	4.45e-01	100.0%	83.8%
2dg8D00	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.53	47.0	3.99e-01	99.0%	97.1%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3686422	621.1.1.0 ↗	alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain	0.65	49.0	4.89e-01	77.9%	91.4%
3970769	3921.1.1.0 ↗	alpha complex topology › Na(+)-translocating NADH-quinone reductase subunit D › Na(+)-translocating NADH-quinone reductase subunit D › Na(+)-translocating NADH-quinone reductase subunit D	0.65	48.0	3.81e-01	76.0%	46.3%
3889971	109.4.1.1643 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RSLD_CPSF6	0.58	40.0	3.99e-01	99.0%	67.3%
4030397	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.57	48.0	3.35e-01	93.3%	32.5%
3389546	604.1.1.1 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin	0.55	41.0	4.57e-01	99.0%	100.0%
3640330	604.1.1.0 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat	0.54	46.0	4.20e-01	92.3%	95.0%
3216888	174.1.1.0 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain	0.54	38.0	3.21e-01	71.2%	61.8%
3762489	109.4.1.777 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.53	38.0	2.68e-01	76.0%	22.7%
4563321	604.9.1.1 ↗	alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p	0.53	36.0	3.96e-01	96.2%	88.1%
4011777	4121.1.1.0 ↗	a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like	0.52	45.0	3.16e-01	99.0%	56.6%
3633547	603.1.1.19 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-18_N	0.52	40.0	3.07e-01	82.7%	52.7%