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hypothetical_protein_psal_cds_203
Euk-VirPandoravirus_salinus
hypothetical_protein_psal_cds_203__YP_008436784__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_008436784 ↗
- Protein ID:
- hypothetical_protein_psal_cds_203
- Kingdom:
- euk
Quality
49.8
mean pLDDT
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 71-117
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3dlcA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 49.0 | 3.36e-01 | 100.0% | 84.5% |
| 1fc6A01 | 3.30.750.44 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.58 | 46.0 | 3.82e-01 | 97.9% | 96.9% |
| 2j0nB00 | 1.20.1710.10 | Mainly Alpha › Up-down Bundle › IpaD-like › IpaD-like | 0.57 | 40.0 | 2.75e-01 | 78.7% | 48.1% |
| 6ofsA01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.56 | 42.0 | 2.82e-01 | 85.1% | 38.2% |
| 3bc9A01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 40.0 | 3.34e-01 | 85.1% | 60.2% |
| 4psrA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 39.0 | 3.11e-01 | 91.5% | 74.6% |
| 1fhgA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 35.0 | 2.91e-01 | 78.7% | 44.1% |
| 8sppA01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.50 | 37.0 | 2.36e-01 | 91.5% | 40.8% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5040280 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.58 | 41.0 | 3.72e-01 | 78.7% | 100.0% |
| 4422964 | 309.1.2.2 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › tRNA_bind_4 | 0.57 | 44.0 | 3.15e-01 | 91.5% | 82.4% |
| 4467673 | 309.1.1.19 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16, Peptidase_M16_C, Peptidase_M16_M | 0.57 | 44.0 | 2.57e-01 | 97.9% | 31.7% |
| 3254339 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 39.0 | 3.42e-01 | 78.7% | 51.2% |
| 3789875 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.55 | 44.0 | 2.86e-01 | 100.0% | 21.1% |
| 4600900 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.55 | 38.0 | 3.14e-01 | 78.7% | 39.0% |
| 1312358 | 2004.1.1.183 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_9 | 0.54 | 40.0 | 2.98e-01 | 87.2% | 57.2% |
| 5007793 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.53 | 37.0 | 3.25e-01 | 78.7% | 45.9% |
| 4006715 | 309.1.1.2 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16,Peptidase_M16_C | 0.52 | 38.0 | 2.61e-01 | 87.2% | 65.2% |
| 4341158 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.50 | 37.0 | 2.76e-01 | 89.4% | 55.2% |
D2
high
residues 137-190