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hypothetical_protein_psal_cds_234
Euk-VirPandoravirus_salinus
hypothetical_protein_psal_cds_234__YP_009429979__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_009429979 ↗
- Protein ID:
- hypothetical_protein_psal_cds_234
- Kingdom:
- euk
Quality
69.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 38-94
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6f1eA01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.75 | 51.0 | 3.77e-01 | 87.7% | 28.8% |
| 3f2eA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 46.0 | 4.12e-01 | 70.2% | 48.2% |
| 1zv1A00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.69 | 48.0 | 4.79e-01 | 73.7% | 72.9% |
| 1f45B00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.65 | 54.0 | 4.05e-01 | 89.5% | 60.2% |
| 3mesA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.61 | 46.0 | 3.02e-01 | 86.0% | 76.3% |
| 3bm1A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.61 | 45.0 | 3.15e-01 | 78.9% | 45.2% |
| 1bgvA03 | 1.10.285.10 | Mainly Alpha › Orthogonal Bundle › Glutamate Dehydrogenase; Chain A, domain 3 › Glutamate Dehydrogenase, chain A, domain 3 | 0.56 | 38.0 | 3.54e-01 | 71.9% | 51.3% |
| 5dvwA00 | 1.20.120.1160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.54 | 42.0 | 3.25e-01 | 86.0% | 92.4% |
| 2cmpA00 | 1.10.10.1400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Terminase, small subunit, N-terminal DNA-binding domain, HTH motif | 0.51 | 35.0 | 3.60e-01 | 77.2% | 76.8% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4030224 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.78 | 68.0 | 5.16e-01 | 98.2% | 43.7% |
| 3226963 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.78 | 48.0 | 4.56e-01 | 71.9% | 53.8% |
| 3267527 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.69 | 48.0 | 4.34e-01 | 77.2% | 54.7% |
| 3798378 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 47.0 | 4.30e-01 | 73.7% | 72.0% |
| 3993438 | 3552.1.1.0 ↗ | alpha arrays › Pfam family PF09836 N-terminal domain › Pfam family PF09836 N-terminal domain › Pfam family PF09836 N-terminal domain | 0.68 | 45.0 | 4.10e-01 | 71.9% | 50.0% |