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hypothetical_protein_psal_cds_318

Euk-Vir

Pandoravirus_salinus

hypothetical_protein_psal_cds_318__YP_008437003__Pandoravirus_salinus__1349410

Identity

Accession:
YP_008437003 ↗
Protein ID:
hypothetical_protein_psal_cds_318
Kingdom:
euk

Quality

70.8 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 30-279
PDB
Domain cluster: rep: p31K_protein__YP_009259412__Short-finned_eel_ranavirus__638660__D3-234
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1je5A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 48.0 5.60e-01 79.6% 92.3%
1eu3A02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 23.0 3.85e-01 74.4% 96.2%
2rkuA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 20.0 3.11e-01 90.4% 86.5%
4hljA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 20.0 2.92e-01 84.8% 71.4%
2vz6B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 19.0 3.09e-01 73.2% 91.6%
1x8bA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 17.0 2.88e-01 84.8% 82.1%
3c4bA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 14.0 2.67e-01 88.0% 83.6%
2rc5B01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 29.0 3.71e-01 81.2% 96.4%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3380367 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.82 62.0 7.04e-01 94.8% 99.0%
4478491 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.74 31.0 4.95e-01 78.4% 97.1%
404 2.2.1.1 ↗ beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › Stap_Strp_toxin 0.65 25.0 3.92e-01 94.0% 88.7%
3487251 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.51 14.0 2.46e-01 88.0% 70.0%