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hypothetical_protein_psal_cds_326
Euk-VirPandoravirus_salinus
hypothetical_protein_psal_cds_326__YP_008437020__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_008437020 ↗
- Protein ID:
- hypothetical_protein_psal_cds_326
- Kingdom:
- euk
Quality
70.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 7-68
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ibkB00 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.81 | 52.0 | 5.88e-01 | 71.0% | 89.1% |
| 4eqyA02 | 1.20.1180.10 | Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain | 0.69 | 47.0 | 4.56e-01 | 71.0% | 74.3% |
| 2i7nA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 40.0 | 3.07e-01 | 77.4% | 47.1% |
| 1e5rB02 | 1.10.1720.10 | Mainly Alpha › Orthogonal Bundle › Proline Oxidase; Chain: A, Domain 2 › L-proline 3-hydroxylase, C-terminal domain | 0.56 | 43.0 | 3.98e-01 | 88.7% | 100.0% |
| 4jkzA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 44.0 | 3.22e-01 | 88.7% | 64.2% |
| 1zq3P00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.55 | 37.0 | 3.65e-01 | 71.0% | 80.9% |
| 3mcpA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 39.0 | 2.78e-01 | 88.7% | 45.6% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4446417 | 145.1.1.31 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › PF29466 | 0.89 | 56.0 | 6.21e-01 | 71.0% | 80.0% |
| 3341479 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.89 | 56.0 | 5.34e-01 | 71.0% | 57.1% |
| 3437176 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.84 | 53.0 | 5.41e-01 | 71.0% | 66.7% |
| 3380603 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.82 | 51.0 | 5.84e-01 | 71.0% | 88.9% |
| 3206488 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.81 | 55.0 | 6.05e-01 | 71.0% | 94.0% |
| 3228181 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.79 | 52.0 | 5.90e-01 | 74.2% | 93.3% |
| 4284024 | 207.1.1.224 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF29466, PF29477 | 0.78 | 60.0 | 3.77e-01 | 80.6% | 19.8% |
| 3195187 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.78 | 53.0 | 6.04e-01 | 71.0% | 100.0% |
| 3195154 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.76 | 52.0 | 5.62e-01 | 71.0% | 96.0% |
| 3469374 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.76 | 58.0 | 3.43e-01 | 80.6% | 13.5% |
| 3680688 | 207.1.1.85 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like | 0.74 | 55.0 | 3.24e-01 | 77.4% | 14.1% |
| 3665552 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.74 | 57.0 | 3.34e-01 | 82.3% | 12.9% |
| None | — | 0.69 | 48.0 | 5.24e-01 | 74.2% | 100.0% | |
| 4648967 | 207.1.1.116 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_FBXL15 | 0.67 | 50.0 | 3.17e-01 | 80.6% | 19.1% |
| 3206113 | 207.1.1.85 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like | 0.67 | 50.0 | 3.09e-01 | 80.6% | 16.1% |
| 3803894 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.67 | 52.0 | 4.92e-01 | 96.8% | 70.7% |
| 3204159 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.65 | 45.0 | 4.88e-01 | 74.2% | 94.0% |
| 3965868 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.65 | 42.0 | 4.31e-01 | 82.3% | 70.0% |
| 2139027 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.61 | 52.0 | 3.38e-01 | 100.0% | 34.2% |
| 4061448 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.53 | 45.0 | 2.95e-01 | 100.0% | 52.3% |
| 4626373 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.50 | 35.0 | 3.05e-01 | 75.8% | 90.5% |