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hypothetical_protein_psal_cds_355

Euk-Vir

Pandoravirus_salinus

hypothetical_protein_psal_cds_355__YP_008437074__Pandoravirus_salinus__1349410

Identity

Accession:
YP_008437074 ↗
Protein ID:
hypothetical_protein_psal_cds_355
Kingdom:
euk

Quality

76.6 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

View cluster (43 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-129
PDB
Domain cluster: rep: kelch-containing_protein__YP_010085636__Akhmeta_virus__2200830__D2-108
D2 high residues 133-198
PDB
Domain cluster: rep: hypothetical_protein_pmac_cds_274__YP_009480958__Pandoravirus_macleodensis__2107707__D136-214
D3 high residues 210-402
PDB
Domain cluster: rep: BTB_domain_containing_protein__YP_008319091__Pandoravirus_dulcis__1349409__D292-403_419-471
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3o0lA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 36.0 4.64e-01 81.9% 91.7%
2vzsA05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 33.0 4.40e-01 78.8% 89.1%
5hdwA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.66 38.0 4.50e-01 82.9% 82.4%
4aeeA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 26.0 3.62e-01 73.6% 73.2%
2f1eA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.64 35.0 4.32e-01 78.8% 85.3%
2r39A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 33.0 4.21e-01 79.3% 85.3%
4wyqB00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.63 25.0 3.98e-01 100.0% 94.7%
3of6E00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 32.0 4.14e-01 77.7% 87.5%
2ccvA00 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 32.0 4.22e-01 91.7% 98.0%
5ikuA01 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.57 30.0 3.78e-01 100.0% 88.5%
2y7lA02 2.60.40.2430 Mainly Beta › Sandwich › Immunoglobulin-like › Agglutinin-like protein, N-terminal domain, N2 subdomain 0.57 35.0 3.92e-01 81.9% 77.5%
2k78A00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 30.0 3.59e-01 99.5% 76.2%
2o8qA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 27.0 3.30e-01 99.5% 71.3%
2vm9A02 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 28.0 3.76e-01 95.9% 98.0%
3jqwC00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.53 29.0 3.50e-01 100.0% 79.3%
1sefA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 28.0 3.36e-01 100.0% 75.6%
4kq7A01 2.60.120.1390 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF2961 0.52 31.0 3.31e-01 99.0% 66.7%
4indA02 2.60.120.1310 Mainly Beta › Sandwich › Jelly Rolls › 0.50 27.0 3.35e-01 85.0% 84.8%
4ll1C02 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 32.0 3.71e-01 85.5% 87.9%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3254117 11.1.1.67 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF525 0.71 39.0 4.80e-01 81.3% 85.0%
4229796 11.1.1.67 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF525 0.69 38.0 4.63e-01 82.9% 81.6%
3937491 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 40.0 4.66e-01 83.4% 80.7%
3762480 11.1.5.83 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › BTBD16_C 0.67 45.0 5.31e-01 96.9% 99.2%
3771545 11.1.1.67 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF525 0.67 40.0 4.47e-01 83.4% 74.7%
3222012 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 37.0 4.53e-01 83.4% 83.2%
4013561 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 36.0 4.39e-01 79.3% 84.8%
3641999 11.10.1.5 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 0.64 43.0 5.00e-01 91.7% 96.3%
3265657 11.10.1.5 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 0.63 47.0 5.14e-01 100.0% 94.2%
3459780 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.61 45.0 5.14e-01 94.8% 100.0%
4027710 11.1.1.45 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Sec63 0.61 34.0 3.71e-01 78.2% 63.6%
4934545 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 33.0 4.15e-01 78.8% 89.1%
3315197 11.10.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.60 44.0 5.02e-01 95.3% 100.0%
3476742 11.10.1.5 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 0.60 43.0 4.94e-01 97.4% 97.9%
3826215 11.1.1.45 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Sec63 0.60 33.0 4.14e-01 78.2% 87.8%
3704403 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.59 29.0 4.01e-01 100.0% 93.7%
3681048 11.10.1.5 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 0.59 41.0 4.71e-01 91.2% 97.1%
3802278 11.1.1.45 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Sec63 0.58 32.0 3.79e-01 77.2% 77.7%
3486913 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 34.0 4.11e-01 78.2% 90.4%
4938331 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.56 31.0 4.15e-01 80.3% 100.0%
3716385 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 35.0 3.99e-01 96.9% 85.0%
3287504 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 30.0 3.87e-01 78.2% 97.0%
3478950 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.54 33.0 3.68e-01 78.8% 75.5%
5031081 243.3.1.59 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › GvpO 0.53 23.0 3.50e-01 79.8% 96.2%
3651629 708.1.1.1 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM 0.53 30.0 3.79e-01 96.4% 95.5%
3840563 11.1.1.67 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF525 0.52 39.0 4.18e-01 99.5% 87.6%
5014927 10.1.2.183 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC 0.52 29.0 3.78e-01 93.8% 95.5%
4568752 10.32.1.19 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PPC 0.52 29.0 3.78e-01 93.8% 95.5%
4951620 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.52 31.0 3.90e-01 91.2% 99.1%
3806226 708.1.1.1 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM 0.52 32.0 3.47e-01 100.0% 71.9%
3691754 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 40.0 4.03e-01 83.4% 83.0%
3728819 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 40.0 4.01e-01 83.4% 81.5%
3228317 10.41.1.1 ↗ beta sandwiches › jelly-roll › Protein Hikeshi jelly-roll domain › Protein Hikeshi jelly-roll domain › Hikeshi-like_N 0.50 31.0 3.58e-01 99.0% 82.8%