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hypothetical_protein_psal_cds_357

Euk-Vir

Pandoravirus_salinus

hypothetical_protein_psal_cds_357__YP_008437077__Pandoravirus_salinus__1349410

Identity

Accession:
YP_008437077 ↗
Protein ID:
hypothetical_protein_psal_cds_357
Kingdom:
euk

Quality

70.5 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

View cluster (31 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 224-353
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1jkgB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 47.0 4.27e-01 75.4% 85.0%
1of5B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 44.0 4.44e-01 70.0% 97.7%
3q90B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 42.0 4.29e-01 70.0% 91.5%
2k54A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 42.0 4.35e-01 73.1% 92.7%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.56 39.0 3.75e-01 72.3% 86.5%
4eg9A00 2.50.20.40 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.56 40.0 3.34e-01 74.6% 92.2%
1pbyB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 45.0 3.37e-01 93.1% 51.6%
7bj4A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.53 46.0 3.30e-01 94.6% 80.1%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3893447 243.1.1.40 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NXF_NTF2 0.64 46.0 4.03e-01 73.8% 83.1%
3859609 243.1.1.40 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NXF_NTF2 0.62 49.0 4.33e-01 83.8% 87.9%
3692485 243.1.1.87 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2_SigF 0.61 42.0 3.96e-01 70.0% 83.6%
3653935 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.61 49.0 3.65e-01 85.4% 63.3%
5030147 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.58 45.0 4.34e-01 80.8% 76.6%
3205903 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.58 52.0 4.04e-01 99.2% 74.0%
3806972 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.57 42.0 3.05e-01 77.7% 47.8%
3744704 5.1.4.173 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR75_2nd 0.56 47.0 3.44e-01 90.0% 68.8%
4613500 5.1.2.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.56 47.0 3.48e-01 90.8% 66.3%
3961916 243.1.1.10 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL 0.56 39.0 4.16e-01 73.1% 99.1%
3626881 5084.5.1.33 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DNAJC11_beta-barrel 0.56 42.0 3.26e-01 80.0% 97.6%
3383213 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.56 47.0 3.59e-01 92.3% 45.2%
3465790 243.3.1.19 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 0.55 45.0 3.84e-01 91.5% 53.0%
3485757 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 49.0 3.26e-01 95.4% 77.0%
3693425 5.1.2.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.55 47.0 3.41e-01 93.1% 76.1%
3243790 239.3.1.0 ↗ beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain 0.55 37.0 3.34e-01 97.7% 49.4%
4974400 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.54 41.0 3.28e-01 80.0% 91.1%
3618566 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.53 33.0 3.56e-01 99.2% 73.6%
3735902 881.1.1.2 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1 0.53 43.0 3.75e-01 86.9% 64.6%
3216011 243.1.1.109 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF5382, DUF5382_C 0.52 44.0 3.42e-01 91.5% 74.9%
4019479 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.52 39.0 3.02e-01 80.0% 90.0%
3735913 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.52 36.0 2.78e-01 70.8% 86.8%
4015408 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.51 39.0 2.87e-01 80.0% 84.8%
4987033 243.3.1.3 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.51 37.0 4.03e-01 84.6% 95.2%
None — 0.51 44.0 3.10e-01 93.1% 42.5%
3640060 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.51 36.0 2.89e-01 72.3% 86.2%
3964905 5084.1.1.13 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HpuA 0.50 41.0 3.22e-01 88.5% 91.2%