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hypothetical_protein_psal_cds_392

Euk-Vir

Pandoravirus_salinus

hypothetical_protein_psal_cds_392__YP_008437151__Pandoravirus_salinus__1349410

Identity

Accession:: YP_008437151 ↗
Protein ID:: hypothetical_protein_psal_cds_392
Kingdom:: euk

Quality

75.4 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-169

PDB

Domain cluster: rep: hypothetical_protein_pqer_cds_984__YP_009483675__Pandoravirus_quercus__2107709__D76-182_203-236

D2 high residues 203-350

PDB

Domain cluster: rep: hypothetical_protein_TW95_gp1591__YP_009120560__Pandoravirus_inopinatum__1605721__D181-198_210-259_277-315_339-420

D3 high residues 351-461

PDB

Domain cluster: rep: hypothetical_protein_pneo_cds_529__YP_009482139__Pandoravirus_neocaledonia__2107708__D177-292

CATH (15)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1e3mB04	1.10.1420.10	Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 ›	0.58	36.0	3.27e-01	74.8%	46.1%
7yu4A01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.57	51.0	3.94e-01	100.0%	89.1%
6c1qB02	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.56	50.0	3.77e-01	100.0%	98.2%
5tgzA01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.55	49.0	3.67e-01	100.0%	92.8%
7cj3A01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.55	48.0	3.75e-01	100.0%	84.1%
7f16R01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.54	46.0	3.53e-01	95.5%	87.4%
6k6iA00	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.54	48.0	3.87e-01	100.0%	96.8%
2zpaA04	1.20.120.890	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA(Met) cytidine acetyltransferase, tail domain	0.53	38.0	3.54e-01	73.9%	82.0%
4zudA01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.53	46.0	3.60e-01	98.2%	99.6%
1j1vA00	1.10.1750.10	Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain	0.53	35.0	3.77e-01	82.9%	80.9%
2xppA00	1.20.930.10	Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	0.53	37.0	3.48e-01	72.1%	91.2%
5zbqA01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.52	45.0	3.42e-01	100.0%	94.6%
3b34A05	1.25.50.10	Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain	0.51	39.0	2.81e-01	80.2%	51.7%
1tx9A00	1.10.1850.10	Mainly Alpha › Orthogonal Bundle › Procapsid Of Bacteriophage Phix174, Chain 1 › Scaffold protein D	0.51	46.0	4.26e-01	100.0%	97.9%
4m0mA03	1.20.1270.430	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.50	34.0	3.83e-01	96.4%	96.2%

ECOD (17)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3227450	5001.1.1.41 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw	0.59	53.0	3.74e-01	100.0%	85.2%
3930016	5001.1.1.27 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Sre	0.59	52.0	3.98e-01	100.0%	94.4%
3894309	5001.1.1.0 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like	0.57	52.0	3.86e-01	100.0%	87.5%
4021636	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.56	40.0	3.86e-01	73.0%	96.8%
3927604	5001.1.1.0 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like	0.55	48.0	3.58e-01	99.1%	81.3%
3781008	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.54	38.0	3.21e-01	71.2%	80.5%
4014516	5001.1.1.80 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Dicty_CAR	0.54	48.0	3.51e-01	100.0%	92.3%
3882204	5001.1.1.1 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1	0.54	47.0	3.44e-01	99.1%	86.1%
3609066	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.54	40.0	4.01e-01	78.4%	93.0%
4023163	109.4.1.163 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SYMPK_PTA1_N	0.53	39.0	2.84e-01	78.4%	59.1%
4003415	5001.1.1.0 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like	0.53	46.0	3.48e-01	99.1%	85.5%
3638800	611.3.1.1 ↗	alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26	0.53	37.0	3.41e-01	73.0%	87.3%
3273128	1075.1.1.1 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane	0.52	44.0	3.42e-01	97.3%	46.9%
4987735	601.1.2.0 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608)	0.52	40.0	4.00e-01	82.9%	94.8%
4118454	611.3.1.1 ↗	alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26	0.52	36.0	2.93e-01	72.1%	55.7%
3932965	601.1.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin	0.50	39.0	3.29e-01	82.0%	88.3%
4375416	611.3.1.1 ↗	alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26	0.50	36.0	2.96e-01	74.8%	60.5%

D4 high residues 479-598

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1zkrB00	1.20.920.50	Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A ›	0.55	47.0	4.44e-01	93.3%	77.9%