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hypothetical_protein_psal_cds_444
Euk-VirPandoravirus_salinus
hypothetical_protein_psal_cds_444__YP_008437266__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_008437266 ↗
- Protein ID:
- hypothetical_protein_psal_cds_444
- Kingdom:
- euk
Quality
71.4
mean pLDDT
Cluster
View cluster (44 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 39-188
D2
high
residues 251-396
D3
high
residues 402-525
Domain cluster:
rep: hypothetical_protein_pneo_cds_529__YP_009482139__Pandoravirus_neocaledonia__2107708__D177-292
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nrhA00 | 1.20.120.1550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Protein of unknown function DUF5063 | 0.55 | 38.0 | 3.58e-01 | 71.0% | 89.9% |
| 4o6mA02 | 1.20.120.1760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.53 | 43.0 | 3.78e-01 | 88.7% | 85.6% |
| 1orjD00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.52 | 40.0 | 4.01e-01 | 79.8% | 88.0% |
| 3mfnB00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.52 | 40.0 | 4.02e-01 | 100.0% | 79.4% |
| 2ip6A00 | 1.20.1440.140 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.52 | 31.0 | 3.52e-01 | 96.8% | 81.6% |
| 1vu2201 | 1.20.58.1070 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 41.0 | 3.67e-01 | 85.5% | 92.9% |
| 4nx8B00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.50 | 37.0 | 3.02e-01 | 79.0% | 70.3% |
| 2fuqA01 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.50 | 43.0 | 3.19e-01 | 93.5% | 97.6% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3450385 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.60 | 39.0 | 3.48e-01 | 100.0% | 45.7% |
| 3378153 | 1075.1.1.21 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane+PDR_assoc | 0.57 | 50.0 | 3.88e-01 | 96.8% | 48.7% |
| 4976369 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.56 | 32.0 | 3.36e-01 | 70.2% | 60.9% |
| 3606768 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 41.0 | 3.05e-01 | 83.1% | 64.4% |
| 5060007 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.53 | 31.0 | 3.01e-01 | 91.9% | 51.1% |
| 3489206 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.51 | 45.0 | 3.41e-01 | 100.0% | 89.8% |
| 3671005 | 611.3.1.0 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.51 | 36.0 | 3.58e-01 | 75.0% | 83.7% |