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hypothetical_protein_psal_cds_549
Euk-VirPandoravirus_salinus
hypothetical_protein_psal_cds_549__YP_008437464__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_008437464 ↗
- Protein ID:
- hypothetical_protein_psal_cds_549
- Kingdom:
- euk
Quality
72.3
mean pLDDT
Cluster
View cluster (30 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-75
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xo0A01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.62 | 45.0 | 3.97e-01 | 79.2% | 80.2% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.59 | 44.0 | 3.80e-01 | 81.9% | 75.0% |
| 3f6tA02 | 1.10.20.110 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › | 0.58 | 47.0 | 3.86e-01 | 93.1% | 50.3% |
| 3nbxX03 | 1.20.58.1510 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 43.0 | 3.95e-01 | 84.7% | 92.1% |
| 3wirA02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.55 | 45.0 | 2.84e-01 | 88.9% | 49.5% |
| 4epzA00 | 1.25.40.810 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ | 0.54 | 40.0 | 3.16e-01 | 77.8% | 56.5% |
| 4w66B00 | 1.20.1050.130 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 44.0 | 3.24e-01 | 95.8% | 51.4% |
| 3o6xA02 | 1.20.120.1560 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.53 | 37.0 | 3.07e-01 | 76.4% | 53.4% |
| 7ml0M01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 38.0 | 3.68e-01 | 90.3% | 67.1% |
| 5ko4A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.52 | 35.0 | 3.23e-01 | 70.8% | 67.3% |
| 3pe0A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 39.0 | 3.55e-01 | 86.1% | 91.5% |
| 2rfbA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.51 | 41.0 | 2.71e-01 | 91.7% | 56.8% |
| 5n17A01 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.51 | 37.0 | 3.35e-01 | 79.2% | 67.3% |
| 3di2A00 | 1.20.1250.50 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.51 | 43.0 | 3.77e-01 | 98.6% | 92.2% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3213547 | 196.1.1.1 ↗ | alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › RGS | 0.61 | 51.0 | 4.10e-01 | 95.8% | 66.7% |
| 4179654 | 196.1.1.1 ↗ | alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › RGS | 0.60 | 50.0 | 3.96e-01 | 95.8% | 51.9% |
| 3886344 | 109.4.1.2231 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_Maestro, HEAT_Maestro_2, HEAT_MROH2B_1st, HEAT_MROH2B_C | 0.59 | 42.0 | 2.28e-01 | 76.4% | 11.5% |
| 3600767 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 42.0 | 2.78e-01 | 79.2% | 19.1% |
| 5020412 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.56 | 43.0 | 3.82e-01 | 83.3% | 82.9% |
| 5063374 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.55 | 47.0 | 3.79e-01 | 100.0% | 49.6% |
| 3214973 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 43.0 | 2.77e-01 | 88.9% | 31.2% |
| 3988294 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 44.0 | 3.24e-01 | 95.8% | 93.3% |
| 3358888 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.52 | 39.0 | 3.53e-01 | 84.7% | 70.0% |
| 3709846 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 43.0 | 3.44e-01 | 95.8% | 88.7% |
| 3990885 | 164.1.1.0 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II | 0.52 | 37.0 | 3.47e-01 | 75.0% | 77.8% |
| 3941104 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.52 | 40.0 | 3.26e-01 | 84.7% | 74.3% |
| 3835389 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.51 | 38.0 | 2.60e-01 | 81.9% | 36.3% |
| 4970972 | 604.5.1.83 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › NfeD_membrane | 0.51 | 35.0 | 3.44e-01 | 73.6% | 90.0% |
| 3891904 | 109.4.1.1608 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_Maestro_2, HEAT_MROH2B_1st | 0.51 | 40.0 | 2.59e-01 | 87.5% | 36.4% |
| 3203288 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.50 | 36.0 | 3.71e-01 | 79.2% | 78.6% |
| 4024393 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.50 | 38.0 | 3.69e-01 | 83.3% | 96.2% |
D2
medium
residues 148-236
D3
medium
residues 256-312
D4
medium
residues 313-464