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hypothetical_protein_psal_cds_551
Euk-VirPandoravirus_salinus
hypothetical_protein_psal_cds_551__YP_008437466__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_008437466 ↗
- Protein ID:
- hypothetical_protein_psal_cds_551
- Kingdom:
- euk
Quality
86.3
mean pLDDT
Cluster
View cluster (21 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 24-84
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1iknD00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.77 | 67.0 | 4.62e-01 | 100.0% | 40.5% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3483336 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.80 | 67.0 | 5.34e-01 | 91.8% | 51.7% |
| 3562937 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.80 | 66.0 | 4.76e-01 | 90.2% | 38.2% |
| 3462930 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.79 | 63.0 | 4.83e-01 | 88.5% | 40.7% |
| 3998061 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.75 | 66.0 | 4.87e-01 | 100.0% | 39.6% |
| 3812368 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.74 | 65.0 | 4.48e-01 | 100.0% | 41.9% |
| 3312606 | 176.1.1.1 ↗ | alpha arrays › Annexin › Annexin › Annexin › Annexin | 0.64 | 49.0 | 4.55e-01 | 85.2% | 86.3% |
D2
medium
residues 85-166
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wy6A00 | 1.25.40.350 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.67 | 58.0 | 4.76e-01 | 100.0% | 59.1% |
| 2ycdA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.66 | 45.0 | 4.05e-01 | 70.7% | 83.8% |
| 1n3kA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.56 | 36.0 | 3.13e-01 | 98.8% | 41.5% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3260809 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.77 | 68.0 | 5.71e-01 | 96.3% | 63.0% |
| 3251262 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.73 | 64.0 | 4.55e-01 | 100.0% | 39.6% |
| 3543542 | 109.4.1.72 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps16_C | 0.71 | 63.0 | 5.30e-01 | 100.0% | 63.6% |
| 3787937 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 59.0 | 5.43e-01 | 98.8% | 88.5% |
| None | — | 0.69 | 61.0 | 4.28e-01 | 100.0% | 33.3% | |
| 3375267 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.66 | 58.0 | 4.40e-01 | 100.0% | 42.9% |
| 3461432 | 109.4.1.1269 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif | 0.66 | 58.0 | 4.91e-01 | 100.0% | 65.0% |
| 5078529 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.59 | 42.0 | 3.25e-01 | 75.6% | 91.8% |
| 2490487 | 109.46.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) | 0.58 | 44.0 | 3.69e-01 | 84.1% | 51.0% |
| 3754579 | 109.4.1.508 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › KBP_C | 0.56 | 44.0 | 3.55e-01 | 87.8% | 79.4% |
| 4978069 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.55 | 38.0 | 2.95e-01 | 73.2% | 87.4% |
D3
medium
residues 268-332