hypothetical_protein_psal_cds_55

Euk-Vir

Pandoravirus_salinus

hypothetical_protein_psal_cds_55__YP_008436516__Pandoravirus_salinus__1349410

Identity

70.5 mean pLDDT

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

View cluster (23 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-82

PDB

Domain cluster: rep: hypothetical_protein_psal_cds_56__YP_008436517__Pandoravirus_salinus__1349410__D71-141

D2 high residues 122-190

PDB

Domain cluster: rep: hypothetical_protein_psal_cds_388__YP_008437143__Pandoravirus_salinus__1349410__D124-190

D3 medium residues 191-331

PDB

Domain cluster: rep: hypothetical_protein_psal_cds_57__YP_008436518__Pandoravirus_salinus__1349410__D208-343

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2hoqA02	1.10.150.520	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 ›	0.58	28.0	3.70e-01	95.0%	82.3%
3tu3B03	1.20.1050.100	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.56	31.0	2.93e-01	100.0%	44.7%
2p5tA00	1.10.8.130	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.53	32.0	3.89e-01	100.0%	91.3%
3iieB03	1.10.1740.10	Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif	0.52	27.0	3.31e-01	92.9%	78.8%
3lmmA02	6.10.10.130	Special › Helix non-globular › Helicase, Ruva Protein; domain 3 ›	0.52	27.0	3.38e-01	95.0%	84.8%
4cbeA00	1.20.120.1640	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.50	35.0	3.10e-01	100.0%	47.8%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3442812	148.1.3.19 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3	0.54	26.0	3.29e-01	86.5%	75.3%
3287415	1075.5.1.2 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MurJ	0.53	45.0	3.73e-01	91.5%	82.0%
3652766	5069.1.1.0 ↗	alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes	0.52	30.0	3.33e-01	97.9%	69.1%
5036339	3625.1.1.0 ↗	alpha bundles › CRISPR RNA silencing complex Cmr2 subunit second helical domain › CRISPR RNA silencing complex Cmr2 subunit second helical domain › CRISPR RNA silencing complex Cmr2 subunit second helical domain	0.51	25.0	3.04e-01	93.6%	70.0%

D4 medium residues 332-503

PDB