←Back to structures

hypothetical_protein_psal_cds_617

Euk-Vir

Pandoravirus_salinus

hypothetical_protein_psal_cds_617__YP_009430042__Pandoravirus_salinus__1349410

Identity

Accession:
YP_009430042 ↗
Protein ID:
hypothetical_protein_psal_cds_617
Kingdom:
euk

Quality

75.4 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

View cluster (53 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 264-325
PDB
Domain cluster: rep: hypothetical_protein_psal_cds_895__YP_009430090__Pandoravirus_salinus__1349410__D186-270
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3b7bB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.71 62.0 4.22e-01 98.4% 31.7%
2zgdA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.70 58.0 4.98e-01 91.9% 62.9%
3ehrA02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.66 56.0 4.66e-01 98.4% 62.1%
3lvqE03 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.65 51.0 5.26e-01 87.1% 96.6%
4qfvC02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.65 52.0 5.13e-01 88.7% 87.7%
4evfA01 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.58 48.0 4.66e-01 96.8% 95.8%
2gn4B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 47.0 3.30e-01 100.0% 52.9%
2i2xB01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.57 46.0 4.02e-01 93.5% 85.0%
4a8eA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.55 42.0 3.84e-01 87.1% 70.1%
5lsmG00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 41.0 2.68e-01 95.2% 30.5%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3264552 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.77 68.0 5.90e-01 98.4% 70.5%
3260809 109.3.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.71 62.0 4.89e-01 100.0% 47.4%
3801978 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.70 58.0 4.58e-01 95.2% 52.6%
3248778 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.70 61.0 3.73e-01 96.8% 20.3%
3314628 109.4.1.1271 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 0.69 59.0 4.18e-01 100.0% 34.8%
3201698 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.69 59.0 4.21e-01 96.8% 41.1%
3757627 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.68 58.0 3.71e-01 100.0% 20.3%
3804193 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.65 53.0 3.78e-01 95.2% 31.2%
3686590 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.64 53.0 3.93e-01 100.0% 40.5%
1556778 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 53.0 4.35e-01 100.0% 92.9%
3207748 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.63 54.0 3.41e-01 100.0% 36.2%
3833516 109.4.1.1261 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long 0.63 52.0 3.44e-01 98.4% 24.7%
3810029 109.4.1.1262 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.62 50.0 4.13e-01 98.4% 52.3%
3376741 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.61 50.0 3.76e-01 96.8% 38.9%
3421022 109.4.1.1279 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long, TPR_24 0.61 51.0 3.47e-01 100.0% 29.8%
3322667 109.4.1.1267 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif 0.61 51.0 2.85e-01 100.0% 7.9%
3828878 109.4.1.1260 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long 0.60 50.0 3.72e-01 96.8% 38.3%
3340219 109.4.1.1258 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 0.60 51.0 4.03e-01 100.0% 57.9%
3660802 109.4.1.1365 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2, TPR_24 0.59 49.0 3.87e-01 96.8% 47.9%
3805059 109.4.1.1277 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, TPR_24 0.58 50.0 4.22e-01 100.0% 67.3%
3806945 109.4.1.1262 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.58 48.0 3.89e-01 100.0% 55.7%
3434424 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.58 48.0 4.06e-01 98.4% 67.8%
3653078 109.4.1.1273 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 0.57 47.0 3.32e-01 98.4% 30.4%
3353463 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.57 47.0 3.61e-01 100.0% 43.6%
5031443 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.54 40.0 3.91e-01 80.6% 95.7%
3191033 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.53 39.0 3.73e-01 80.6% 84.0%
4949618 2005.1.1.4 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.51 41.0 2.67e-01 96.8% 18.8%
D2 medium residues 508-577
PDB