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hypothetical_protein_psal_cds_650
Euk-VirPandoravirus_salinus
hypothetical_protein_psal_cds_650__YP_008437624__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_008437624 ↗
- Protein ID:
- hypothetical_protein_psal_cds_650
- Kingdom:
- euk
Quality
72.5
mean pLDDT
Cluster
View cluster (72 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 5-280
Domain cluster:
rep: hypothetical_protein_psal_cds_627__YP_008437586__Pandoravirus_salinus__1349410__D37-265_280-298
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5cmyA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 27.0 | 3.66e-01 | 93.5% | 73.2% |
| 3itwA02 | 3.30.720.110 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.61 | 13.0 | 2.99e-01 | 72.1% | 83.9% |
| 8alzB08 | 1.10.3380.10 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain | 0.54 | 28.0 | 3.79e-01 | 85.5% | 98.5% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 25.0 | 3.40e-01 | 79.0% | 92.5% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3675026 | 109.4.1.359 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exo70_C | 0.57 | 32.0 | 2.88e-01 | 97.1% | 38.7% |
| 3838216 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.56 | 28.0 | 3.79e-01 | 79.3% | 90.3% |
| 3481134 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 28.0 | 3.10e-01 | 91.3% | 60.9% |
| 3682306 | 633.23.1.32 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › CASP_dom | 0.51 | 28.0 | 3.58e-01 | 80.4% | 87.3% |
| 3611803 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.51 | 32.0 | 3.38e-01 | 93.8% | 66.8% |
| 3704726 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.51 | 27.0 | 3.40e-01 | 73.2% | 83.0% |