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hypothetical_protein_psal_cds_70

Euk-Vir

Pandoravirus_salinus

hypothetical_protein_psal_cds_70__YP_008436540__Pandoravirus_salinus__1349410

Identity

Accession:
YP_008436540 ↗
Protein ID:
hypothetical_protein_psal_cds_70
Kingdom:
euk

Quality

77.6 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

View cluster (86 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 198-268
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3b7bB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.79 72.0 5.00e-01 100.0% 37.1%
4rlyA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.79 71.0 4.60e-01 100.0% 26.6%
4uucA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.78 72.0 4.95e-01 100.0% 36.7%
4bszB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.78 70.0 5.44e-01 100.0% 62.0%
3ehrA02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.76 68.0 5.77e-01 100.0% 71.6%
2zgdA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.74 66.0 5.92e-01 98.6% 78.4%
4jgiA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.74 53.0 5.13e-01 76.1% 96.2%
3ezxA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.67 49.0 4.63e-01 77.5% 90.7%
1xo0A01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.65 47.0 4.14e-01 78.9% 73.0%
2i2xB01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.64 47.0 4.23e-01 78.9% 84.0%
4irnA01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.63 45.0 3.91e-01 77.5% 79.0%
6fahC01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.62 44.0 3.80e-01 76.1% 70.6%
2qw6D00 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.58 42.0 4.01e-01 78.9% 89.5%
1gm5A01 1.20.120.630 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › RecG, N-terminal domain 0.57 39.0 3.57e-01 71.8% 57.9%
6f7hA00 1.20.1080.10 Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. 0.56 46.0 3.31e-01 100.0% 81.3%
3dxiA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 46.0 3.15e-01 100.0% 27.8%
3pvuA02 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.51 37.0 3.60e-01 100.0% 68.8%
1i17A00 1.10.790.10 Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain 0.50 37.0 3.26e-01 78.9% 91.6%
1puoB00 1.20.920.50 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › 0.50 38.0 3.03e-01 80.3% 85.9%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3267275 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.83 74.0 5.36e-01 100.0% 37.3%
3258795 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.82 74.0 4.79e-01 100.0% 33.0%
3437396 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.78 70.0 5.10e-01 100.0% 41.6%
3695738 109.3.1.232 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_KRIT1 0.76 69.0 4.24e-01 100.0% 20.5%
4019164 109.3.1.218 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_KRIT1 0.74 67.0 4.91e-01 100.0% 44.3%
3254410 109.3.1.10 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_4 0.74 66.0 5.46e-01 100.0% 59.2%
3999693 109.3.1.6 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › TRP_2 0.72 62.0 4.56e-01 100.0% 46.5%
3253258 109.3.1.171 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 0.71 61.0 4.69e-01 98.6% 48.2%
4577442 109.4.1.923 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › AEP1 0.70 62.0 4.31e-01 100.0% 39.9%
3682097 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.69 59.0 4.68e-01 95.8% 62.1%
4019762 4995.1.1.0 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like 0.61 45.0 4.32e-01 80.3% 97.6%
3442574 109.4.1.1335 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, E_motif 0.61 51.0 3.42e-01 100.0% 25.2%
3818009 109.4.1.1908 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long, E_motif 0.60 53.0 3.53e-01 100.0% 27.6%
3640621 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.59 43.0 3.97e-01 78.9% 85.3%
4670482 109.4.1.517 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Med24_N 0.58 49.0 3.74e-01 100.0% 74.7%
4025539 101.1.2.22 ↗ alpha arrays › HTH › HTH › winged helix domain › PCI 0.54 37.0 3.66e-01 71.8% 82.7%
3456443 2003.1.5.30 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_7 0.53 44.0 2.99e-01 95.8% 29.5%
4256018 604.12.1.5 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › SUV3_C 0.53 35.0 3.41e-01 70.4% 75.3%