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hypothetical_protein_psal_cds_727

Euk-Vir

Pandoravirus_salinus

hypothetical_protein_psal_cds_727__YP_008437779__Pandoravirus_salinus__1349410

Identity

Accession:
YP_008437779 ↗
Protein ID:
hypothetical_protein_psal_cds_727
Kingdom:
euk

Quality

72.4 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

View cluster (23 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 60-119
PDB
D2 medium residues 120-187
PDB
D3 medium residues 188-315
PDB
Domain cluster: representative
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6t0bf00 1.25.40.40 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Cytochrome c oxidase, subunit Va/VI 0.69 51.0 5.58e-01 78.9% 96.1%
5mdtA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.67 50.0 4.72e-01 78.1% 84.9%
3lpzA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.66 49.0 3.73e-01 77.3% 36.8%
4jxtA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.65 49.0 4.88e-01 78.9% 86.2%
4me2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 47.0 4.10e-01 81.2% 54.1%
3gz1A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 43.0 4.14e-01 98.4% 63.9%
7c1iA01 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.61 31.0 3.55e-01 75.0% 65.0%
4uqxA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 37.0 4.42e-01 93.8% 91.0%
1e8yA03 1.25.40.70 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK) 0.59 45.0 3.99e-01 81.2% 69.4%
4evfA02 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.58 33.0 4.16e-01 76.6% 95.9%
1hxiA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 42.0 4.49e-01 87.5% 86.6%
3eslA02 1.25.40.930 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.56 41.0 4.25e-01 79.7% 82.4%
2iqcA00 1.25.40.490 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.56 50.0 4.51e-01 98.4% 87.3%
4eadA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.56 41.0 4.46e-01 78.1% 98.1%
5jj6B01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.56 39.0 4.40e-01 100.0% 94.8%
2ff4A02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 44.0 3.99e-01 86.7% 80.2%
3n71A03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 42.0 3.63e-01 97.7% 49.3%
1vdyA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.55 49.0 4.78e-01 100.0% 90.7%
8sorA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.55 49.0 3.57e-01 97.7% 45.5%
2diwA01 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.54 49.0 4.77e-01 99.2% 95.7%
1wn0A00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.54 31.0 3.15e-01 93.0% 54.2%
1u6zA03 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.53 42.0 4.10e-01 85.9% 87.0%
4j8dD00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 40.0 3.68e-01 78.1% 71.0%
2qk2A01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.52 46.0 3.86e-01 100.0% 61.5%
1exaA00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.52 42.0 3.51e-01 88.3% 87.3%
2yvyA01 1.25.60.10 Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like 0.51 43.0 4.39e-01 100.0% 92.8%
2wviA00 1.25.40.430 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.51 43.0 3.99e-01 90.6% 76.2%
4xi0F00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 44.0 3.98e-01 98.4% 68.0%
3i4gA00 1.25.40.390 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.51 44.0 3.04e-01 99.2% 82.7%
2i6hA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 33.0 3.74e-01 82.8% 88.5%
3ly7A02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 46.0 4.30e-01 100.0% 86.3%
4j8sA00 1.25.40.840 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › CCR4-NOT transcription complex subunit 1 TTP binding domain 0.51 44.0 3.98e-01 97.7% 100.0%
1iygA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.50 39.0 3.90e-01 82.0% 90.2%
6fdpA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.50 40.0 4.17e-01 94.5% 91.7%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3260674 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.76 57.0 3.97e-01 78.1% 26.5%
3323300 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.76 53.0 4.36e-01 75.8% 42.3%
3276094 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.73 53.0 4.57e-01 75.8% 60.0%
3634305 109.3.1.10 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_4 0.70 56.0 5.42e-01 93.8% 75.7%
3419521 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.68 50.0 5.22e-01 76.6% 84.3%
3878217 109.4.1.929 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_ECM29 0.67 50.0 4.32e-01 78.1% 94.5%
3787937 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 49.0 5.16e-01 89.8% 86.7%
3940256 4967.1.1.0 ↗ alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases 0.66 47.0 4.02e-01 72.7% 84.5%
3516017 109.4.1.630 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CNOT1_TTP_bind,CNOT1_HEAT 0.64 58.0 3.96e-01 100.0% 27.8%
3441099 109.4.1.1293 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1 0.64 52.0 5.32e-01 88.3% 89.6%
3443993 109.4.1.1736 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30261 0.63 47.0 4.73e-01 78.9% 84.6%
3328100 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.58 53.0 3.74e-01 97.7% 41.1%
3626611 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 46.0 3.22e-01 100.0% 26.4%
3665244 109.7.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E 0.57 41.0 3.91e-01 95.3% 62.6%
3469557 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.56 50.0 4.28e-01 98.4% 61.5%
3690759 109.54.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp21 0.56 45.0 3.90e-01 85.9% 83.0%
3606878 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 49.0 4.44e-01 97.7% 75.6%
3354769 109.4.1.1254 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.56 50.0 4.30e-01 97.7% 62.4%
3540624 109.4.1.403 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Foie-gras_1 0.55 48.0 4.23e-01 93.8% 91.6%
3457892 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 49.0 4.60e-01 97.7% 78.6%
3665357 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.55 48.0 3.90e-01 95.3% 68.6%
4143673 109.4.1.1265 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PUF, PUF_NOP9 0.55 49.0 3.11e-01 98.4% 30.0%
3501738 109.6.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF 0.55 48.0 4.37e-01 95.3% 89.4%
3399981 109.4.1.1666 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_10 0.55 44.0 4.17e-01 84.4% 74.0%
4434445 109.4.1.192 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.55 43.0 3.98e-01 84.4% 65.3%
3874416 109.4.1.1874 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COG3_C, PF31184 0.55 41.0 3.36e-01 79.7% 75.5%
3664561 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.55 48.0 3.99e-01 97.7% 55.5%
3716850 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 48.0 3.65e-01 100.0% 73.8%
3721413 109.4.1.198 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.54 46.0 4.62e-01 98.4% 92.2%
3469268 226.1.1.11 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB+DUF3420 0.54 48.0 3.91e-01 97.7% 67.9%
3682133 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.52 47.0 4.06e-01 97.7% 66.3%
3684212 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 46.0 4.33e-01 100.0% 100.0%
3642829 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.51 46.0 3.79e-01 96.1% 70.0%
4534092 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 45.0 4.03e-01 97.7% 83.3%
3636229 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.50 44.0 3.73e-01 96.9% 62.7%
D4 medium residues 316-420
PDB
Domain cluster: rep: hypothetical_protein_pqer_cds_1015__YP_009483706__Pandoravirus_quercus__2107709__D365-451