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hypothetical_protein_psal_cds_772

Euk-Vir

Pandoravirus_salinus

hypothetical_protein_psal_cds_772__YP_008437845__Pandoravirus_salinus__1349410

Identity

Accession:
YP_008437845 ↗
Protein ID:
hypothetical_protein_psal_cds_772
Kingdom:
euk

Quality

71.6 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-55
PDB
Domain cluster: representative
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ibkB00 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.88 61.0 6.60e-01 72.7% 91.3%
4i6jB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.83 58.0 6.42e-01 72.7% 95.2%
6m90A01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.79 63.0 5.11e-01 85.5% 86.9%
2ovrB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.78 63.0 5.34e-01 87.3% 73.6%
3l2oB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.77 56.0 4.82e-01 78.2% 92.0%
3v7dD01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.76 62.0 5.04e-01 89.1% 91.0%
1fs2A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.76 65.0 4.10e-01 92.7% 21.2%
2iufA02 1.20.1370.20 Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › Catalase, four-helical domain 0.71 53.0 4.36e-01 80.0% 60.2%
4by6B00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.71 57.0 4.06e-01 89.1% 52.4%
2e52B01 3.40.91.70 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Type II restriction endonuclease, HindIII 0.65 50.0 3.41e-01 89.1% 76.3%
2l9bA00 1.25.40.630 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.63 46.0 3.97e-01 80.0% 78.0%
1lkvX02 1.10.220.30 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain 0.62 51.0 4.00e-01 98.2% 47.7%
3pivA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.59 43.0 3.18e-01 80.0% 81.4%
1hy5B00 1.20.120.260 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Virulence factor YopE uncharacterised domain 0.58 43.0 3.47e-01 85.5% 70.2%
3eabE00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.56 43.0 3.79e-01 87.3% 96.5%
4o6mA02 1.20.120.1760 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain 0.55 43.0 3.11e-01 96.4% 78.5%
2yx8A00 1.10.150.510 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Receptor activity modifying family 0.53 37.0 3.35e-01 76.4% 86.4%
1g4uS01 1.20.120.260 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Virulence factor YopE uncharacterised domain 0.52 39.0 3.14e-01 87.3% 66.1%
3ygsP00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.52 38.0 3.26e-01 81.8% 76.3%
4dkcB00 1.20.1250.80 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-34 0.51 37.0 2.72e-01 78.2% 70.0%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3461050 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.97 70.0 7.35e-01 74.5% 82.0%
3233030 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.95 65.0 7.53e-01 78.2% 97.5%
3628631 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.94 64.0 6.23e-01 72.7% 65.0%
3380603 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.93 65.0 7.15e-01 72.7% 88.9%
3389442 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.92 66.0 7.28e-01 76.4% 91.1%
3730054 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.91 63.0 5.76e-01 72.7% 60.0%
3214169 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.91 63.0 6.89e-01 72.7% 93.3%
3349711 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.91 63.0 6.92e-01 72.7% 91.1%
3171073 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.90 64.0 4.89e-01 74.5% 71.3%
3341479 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.90 64.0 5.83e-01 74.5% 58.6%
3524044 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 63.0 6.89e-01 72.7% 93.3%
3731257 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 61.0 6.96e-01 76.4% 97.5%
4446417 145.1.1.31 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › PF29466 0.89 63.0 6.63e-01 74.5% 82.0%
3221036 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.88 61.0 6.70e-01 72.7% 88.9%
3680688 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.88 66.0 3.80e-01 78.2% 14.4%
3441171 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 59.0 6.73e-01 70.9% 95.0%
3217628 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.88 60.0 6.77e-01 72.7% 97.5%
3837286 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.86 71.0 5.93e-01 89.1% 86.7%
4017103 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.86 59.0 3.53e-01 72.7% 18.3%
3311874 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.85 66.0 5.88e-01 81.8% 96.0%
3688419 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.85 58.0 6.51e-01 72.7% 97.5%
3219180 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.85 58.0 6.59e-01 70.9% 97.5%
3189161 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.85 61.0 3.57e-01 76.4% 15.2%
3856479 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.85 62.0 3.58e-01 76.4% 16.4%
3866275 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.85 61.0 3.60e-01 76.4% 17.7%
3660387 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.84 64.0 3.82e-01 80.0% 18.8%
3675534 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.84 65.0 5.62e-01 81.8% 87.5%
3223791 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.84 58.0 5.69e-01 74.5% 66.7%
4593317 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 58.0 5.67e-01 74.5% 66.7%
3547224 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 61.0 5.22e-01 78.2% 76.5%
3246267 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.83 56.0 6.35e-01 70.9% 100.0%
3687689 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.82 60.0 3.58e-01 76.4% 19.7%
3810266 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.82 62.0 3.65e-01 80.0% 19.0%
3751898 145.1.1.32 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box_4 0.82 66.0 6.04e-01 85.5% 100.0%
3346715 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.82 63.0 5.60e-01 81.8% 94.7%
3915884 145.1.1.32 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box_4 0.81 69.0 4.91e-01 90.9% 49.7%
3539114 145.1.1.32 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box_4 0.81 68.0 4.51e-01 90.9% 35.7%
3672250 207.1.1.116 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_FBXL15 0.81 72.0 4.79e-01 98.2% 27.4%
3724474 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.81 58.0 3.35e-01 76.4% 13.1%
3446581 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 65.0 5.51e-01 85.5% 94.1%
3728200 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 69.0 6.34e-01 94.5% 100.0%
3189379 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 64.0 6.06e-01 85.5% 81.5%
3491937 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 65.0 5.43e-01 87.3% 93.3%
3184741 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 65.0 5.08e-01 87.3% 95.5%
4160836 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.80 67.0 4.12e-01 90.9% 24.0%
3242169 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.79 55.0 6.17e-01 72.7% 100.0%
3223353 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.79 55.0 6.18e-01 76.4% 100.0%
3208242 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.79 67.0 6.73e-01 94.5% 100.0%
3490408 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 64.0 4.86e-01 87.3% 95.0%
None — 0.79 58.0 3.42e-01 78.2% 15.7%
3833527 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 59.0 5.79e-01 81.8% 91.7%
None — 0.78 74.0 4.10e-01 100.0% 87.9%
3494629 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.78 54.0 5.63e-01 72.7% 86.0%
3226289 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.78 53.0 6.07e-01 76.4% 97.5%
3323668 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.77 60.0 5.40e-01 83.6% 97.3%
3227162 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.77 53.0 6.10e-01 72.7% 100.0%
3216313 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.77 53.0 5.99e-01 70.9% 100.0%
3259075 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 63.0 5.52e-01 87.3% 61.5%
3668090 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.77 67.0 3.55e-01 94.5% 3.7%
3694013 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.77 68.0 5.52e-01 98.2% 81.0%
3811913 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.76 61.0 6.43e-01 89.1% 94.0%
3792735 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.76 63.0 3.73e-01 89.1% 22.4%
3300713 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 61.0 5.51e-01 87.3% 100.0%
3425357 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.76 63.0 5.53e-01 89.1% 97.4%
3399970 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.76 69.0 4.41e-01 100.0% 22.5%
3224201 145.1.1.57 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › zf-TRAF_2 0.76 62.0 4.56e-01 89.1% 50.0%
3442643 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.76 70.0 3.91e-01 100.0% 87.2%
3200311 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.76 63.0 5.64e-01 94.5% 100.0%
3613821 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 62.0 5.68e-01 87.3% 94.3%
3244551 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.76 51.0 5.66e-01 76.4% 97.5%
3542973 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.76 64.0 3.79e-01 90.9% 14.5%
3221696 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.75 61.0 3.53e-01 85.5% 12.5%
3939710 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.75 67.0 6.28e-01 94.5% 93.8%
3468667 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.75 64.0 3.94e-01 90.9% 20.8%
3320433 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.75 57.0 5.53e-01 80.0% 100.0%
3460335 207.1.1.172 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBD, LRR_At5g56370 0.75 61.0 3.55e-01 89.1% 11.2%
None — 0.74 62.0 3.52e-01 89.1% 10.9%
3515309 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.74 65.0 3.82e-01 94.5% 13.6%
3812507 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.73 65.0 5.37e-01 96.4% 95.7%
3191984 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.73 65.0 5.32e-01 100.0% 55.0%
None — 0.73 66.0 3.76e-01 96.4% 84.2%
3243559 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.73 61.0 4.99e-01 92.7% 75.0%
3272640 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.73 60.0 3.72e-01 89.1% 18.6%
None — 0.73 61.0 3.54e-01 90.9% 11.2%
3243105 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.73 61.0 5.05e-01 92.7% 73.7%
3491877 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.72 57.0 3.99e-01 87.3% 68.0%
3230376 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.72 65.0 3.69e-01 98.2% 11.2%
3236656 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.72 56.0 4.22e-01 87.3% 85.7%
3213262 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.72 59.0 4.78e-01 89.1% 68.0%
3230101 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.71 59.0 4.18e-01 94.5% 61.8%
3437971 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.70 58.0 4.90e-01 90.9% 55.6%
3311308 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.70 58.0 3.40e-01 90.9% 11.9%
3236279 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.69 57.0 3.61e-01 92.7% 23.1%
3741846 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.69 54.0 4.51e-01 87.3% 92.0%
3167678 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.69 55.0 3.08e-01 89.1% 6.8%
3816173 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.69 61.0 3.57e-01 100.0% 12.9%
3236774 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.69 59.0 3.67e-01 100.0% 28.9%
4012559 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.68 56.0 4.96e-01 94.5% 89.4%
3639601 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.67 56.0 3.19e-01 92.7% 93.8%
D2 medium residues 56-226
PDB
Domain cluster: rep: hypothetical_protein_psal_cds_771__YP_008437843__Pandoravirus_salinus__1349410__D61-222