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hypothetical_protein_psal_cds_7
Euk-VirPandoravirus_salinus
hypothetical_protein_psal_cds_7__YP_009429942__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_009429942 ↗
- Protein ID:
- hypothetical_protein_psal_cds_7
- Kingdom:
- euk
Quality
70.8
mean pLDDT
Cluster
View cluster (18 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 48-109_126-141
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p58C00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.77 | 49.0 | 4.25e-01 | 98.7% | 44.6% |
| 1sy7A02 | 1.20.1370.20 | Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › Catalase, four-helical domain | 0.68 | 42.0 | 4.50e-01 | 93.6% | 73.4% |
| 3i5pA03 | 1.20.120.1880 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleoporin, helical C-terminal domain | 0.62 | 52.0 | 3.70e-01 | 94.9% | 35.2% |
| 4ezbA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.62 | 53.0 | 4.56e-01 | 92.3% | 90.6% |
| 3jz0A02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.61 | 42.0 | 3.61e-01 | 71.8% | 100.0% |
| 4malA00 | 1.20.58.2200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 41.0 | 4.53e-01 | 98.7% | 91.5% |
| 3ph0C00 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.61 | 40.0 | 4.60e-01 | 98.7% | 100.0% |
| 4yvoA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 47.0 | 4.06e-01 | 100.0% | 53.8% |
| 2iu1A00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.61 | 50.0 | 3.87e-01 | 91.0% | 60.7% |
| 4y6cA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 46.0 | 3.39e-01 | 100.0% | 30.2% |
| 2pbeA02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.61 | 42.0 | 3.58e-01 | 71.8% | 99.2% |
| 3h3mA00 | 1.20.58.380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. | 0.60 | 43.0 | 4.15e-01 | 75.6% | 94.4% |
| 2zopA00 | 1.10.520.30 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain | 0.60 | 45.0 | 4.03e-01 | 97.4% | 56.2% |
| 3qsgA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.59 | 50.0 | 4.39e-01 | 92.3% | 93.9% |
| 3u8vA00 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.58 | 45.0 | 4.44e-01 | 98.7% | 78.3% |
| 2wwxB00 | 1.20.1260.70 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.55 | 47.0 | 3.57e-01 | 98.7% | 65.0% |
| 2uxwA02 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.54 | 41.0 | 3.62e-01 | 84.6% | 74.4% |
| 2yb5F01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.53 | 38.0 | 3.70e-01 | 93.6% | 68.6% |
| 1j5wA02 | 1.20.58.180 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 | 0.53 | 44.0 | 4.45e-01 | 100.0% | 93.5% |
| 2oebA00 | 1.10.520.30 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain | 0.53 | 45.0 | 3.72e-01 | 100.0% | 63.2% |
| 1wcrA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.51 | 45.0 | 4.10e-01 | 98.7% | 86.4% |
| 4cqiA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 44.0 | 4.04e-01 | 98.7% | 99.1% |
| 1rqgA04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.50 | 43.0 | 3.52e-01 | 96.2% | 54.3% |
| 4ydeB00 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.50 | 41.0 | 2.67e-01 | 93.6% | 67.4% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3685817 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 53.0 | 5.82e-01 | 83.3% | 100.0% |
| 3331958 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.65 | 57.0 | 5.38e-01 | 100.0% | 84.2% |
| 3693381 | 129.1.1.12 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › DUF1932 | 0.63 | 53.0 | 4.37e-01 | 92.3% | 80.7% |
| 3262061 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.63 | 49.0 | 4.05e-01 | 85.9% | 61.4% |
| 999207 | 563.2.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › Cas Cmr5-like › Cas Cmr5-like › Cas_Cmr5 | 0.60 | 45.0 | 4.02e-01 | 97.4% | 55.8% |
| 3320131 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.59 | 46.0 | 3.72e-01 | 83.3% | 49.3% |
| 5029773 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.59 | 47.0 | 4.81e-01 | 100.0% | 90.5% |
| 3677754 | 2004.1.1.24 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C | 0.58 | 50.0 | 2.99e-01 | 96.2% | 31.0% |
| 3573562 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 50.0 | 3.13e-01 | 96.2% | 21.2% |
| 3957242 | 191.1.1.41 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › EthR_C | 0.56 | 47.0 | 3.88e-01 | 96.2% | 88.7% |
| 3608758 | 604.12.1.8 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › KATNA1_MIT | 0.55 | 46.0 | 4.62e-01 | 100.0% | 91.3% |
| 4428893 | 601.18.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 › SMBP | 0.54 | 45.0 | 4.27e-01 | 98.7% | 76.7% |
| 4579747 | 3294.1.1.0 ↗ | alpha complex topology › FAS type I helical domain › FAS type I helical domain › FAS type I helical domain | 0.54 | 47.0 | 2.87e-01 | 100.0% | 79.5% |
| 3960897 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.54 | 45.0 | 3.80e-01 | 96.2% | 97.1% |
| 3580283 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.53 | 47.0 | 4.60e-01 | 98.7% | 97.6% |
| 5024538 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.51 | 45.0 | 3.64e-01 | 98.7% | 87.3% |
| 3631582 | 604.7.1.0 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A | 0.51 | 35.0 | 3.31e-01 | 73.1% | 92.0% |
| 4118682 | 601.18.1.22 ↗ | alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 › FTR1 | 0.51 | 40.0 | 3.90e-01 | 100.0% | 80.0% |
D2
high
residues 157-340