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hypothetical_protein_psal_cds_814
Euk-VirPandoravirus_salinus
hypothetical_protein_psal_cds_814__YP_008437917__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_008437917 ↗
- Protein ID:
- hypothetical_protein_psal_cds_814
- Kingdom:
- euk
Quality
72.5
mean pLDDT
Cluster
View cluster (17 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-119
D2
medium
residues 168-221
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vkeB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.69 | 56.0 | 4.79e-01 | 100.0% | 72.3% |
| 4d49A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.65 | 53.0 | 3.55e-01 | 98.1% | 33.6% |
| 8gpsA01 | 1.25.60.10 | Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like | 0.64 | 53.0 | 4.44e-01 | 100.0% | 61.0% |
| 8gpvA01 | 1.25.60.10 | Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like | 0.63 | 54.0 | 4.17e-01 | 100.0% | 53.5% |
| 2kmuA00 | 1.10.10.1460 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.63 | 44.0 | 4.39e-01 | 74.1% | 80.4% |
| 6tblB01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.61 | 49.0 | 4.01e-01 | 94.4% | 73.0% |
| 4yj6A00 | 3.90.1300.10 | Alpha Beta › Alpha-Beta Complex › Amidase signature (AS) enzymes › Amidase signature (AS) domain | 0.59 | 50.0 | 2.95e-01 | 100.0% | 39.2% |
| 1tjcA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 43.0 | 3.78e-01 | 90.7% | 68.4% |
| 1j24A00 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 47.0 | 3.70e-01 | 100.0% | 74.4% |
| 1dulA00 | 1.10.260.30 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › Signal recognition particle, SRP54 subunit, M-domain | 0.56 | 38.0 | 3.57e-01 | 72.2% | 69.1% |
| 1kt1A03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 46.0 | 3.36e-01 | 94.4% | 51.9% |
| 3mzkB03 | 1.20.58.940 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 46.0 | 4.34e-01 | 100.0% | 80.0% |
| 1iygA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 43.0 | 3.34e-01 | 88.9% | 45.1% |
| 6hftA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 45.0 | 3.54e-01 | 96.3% | 55.9% |
| 2lniA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 44.0 | 3.43e-01 | 94.4% | 48.1% |
| 4malA00 | 1.20.58.2200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 41.0 | 4.04e-01 | 83.3% | 89.8% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4542889 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.77 | 66.0 | 4.21e-01 | 96.3% | 22.0% |
| 3750647 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.76 | 63.0 | 3.88e-01 | 94.4% | 21.5% |
| 3383769 | 109.4.1.1273 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 | 0.74 | 62.0 | 4.03e-01 | 96.3% | 24.1% |
| 3325322 | 532.2.1.0 ↗ | alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains | 0.68 | 55.0 | 4.93e-01 | 94.4% | 86.3% |
| 3580010 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 58.0 | 3.44e-01 | 100.0% | 17.7% |
| 3032601 | 109.13.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › MgtE N-terminal domain-like › MgtE N-terminal domain-like › MgtE_N | 0.65 | 55.0 | 4.59e-01 | 100.0% | 64.4% |
| 3838823 | 531.2.1.2 ↗ | alpha arrays › Domains of FliG › Middle domain of FliG › Middle domain of FliG › MgtE_N | 0.64 | 52.0 | 5.08e-01 | 98.1% | 100.0% |
| 3289526 | 109.13.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › MgtE N-terminal domain-like › MgtE N-terminal domain-like › MgtE_N | 0.64 | 53.0 | 4.25e-01 | 100.0% | 52.5% |
| 3387828 | 531.2.1.2 ↗ | alpha arrays › Domains of FliG › Middle domain of FliG › Middle domain of FliG › MgtE_N | 0.64 | 51.0 | 5.02e-01 | 98.1% | 98.3% |
| 3032603 | 109.13.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › MgtE N-terminal domain-like › MgtE N-terminal domain-like › MgtE_N | 0.63 | 53.0 | 4.18e-01 | 100.0% | 50.8% |
| 3353090 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.62 | 50.0 | 3.67e-01 | 92.6% | 35.0% |
| 4999825 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.56 | 43.0 | 3.77e-01 | 96.3% | 87.0% |