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hypothetical_protein_psal_cds_820
Euk-VirPandoravirus_salinus
hypothetical_protein_psal_cds_820__YP_008437927__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_008437927 ↗
- Protein ID:
- hypothetical_protein_psal_cds_820
- Kingdom:
- euk
Quality
51.1
mean pLDDT
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 51-149
D2
high
residues 169-350
D3
high
residues 388-490
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4wzxA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.59 | 37.0 | 4.23e-01 | 71.8% | 86.7% |
| 1htjF00 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.56 | 49.0 | 4.10e-01 | 97.1% | 88.5% |
| 3kezA01 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 45.0 | 3.55e-01 | 96.1% | 72.8% |
| 1k0oB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 40.0 | 3.84e-01 | 82.5% | 84.6% |
| 4kw3A00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.52 | 40.0 | 2.97e-01 | 82.5% | 61.7% |
| 1t5oA01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.51 | 41.0 | 3.80e-01 | 90.3% | 83.0% |
| 3r2cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.50 | 37.0 | 3.42e-01 | 78.6% | 84.1% |
| 3c07B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.50 | 40.0 | 3.22e-01 | 87.4% | 56.5% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3596405 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 42.0 | 3.99e-01 | 70.9% | 83.2% |
| 4038724 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 48.0 | 3.73e-01 | 87.4% | 65.9% |
| 3622326 | 109.25.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A › GAIN | 0.54 | 42.0 | 3.90e-01 | 83.5% | 84.4% |
| 4420971 | 109.25.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A › GAIN | 0.54 | 43.0 | 4.04e-01 | 84.5% | 90.4% |
| 4026711 | 109.4.1.21 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ENTH | 0.54 | 39.0 | 3.60e-01 | 76.7% | 82.1% |
| 3692148 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.54 | 46.0 | 4.06e-01 | 93.2% | 96.0% |
| 3992312 | 109.4.1.1181 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_Epg5_2 | 0.52 | 41.0 | 3.51e-01 | 85.4% | 99.4% |
| 3739652 | 196.1.1.1 ↗ | alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › RGS | 0.51 | 41.0 | 3.67e-01 | 89.3% | 78.7% |
| 3411779 | 109.25.1.7 ↗ | alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A › PF26588 | 0.50 | 41.0 | 4.00e-01 | 89.3% | 83.5% |
D4
high
residues 499-610