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hypothetical_protein_psal_cds_887

Euk-Vir

Pandoravirus_salinus

hypothetical_protein_psal_cds_887__YP_008438047__Pandoravirus_salinus__1349410

Identity

Accession:
YP_008438047 ↗
Protein ID:
hypothetical_protein_psal_cds_887
Kingdom:
euk

Quality

76.8 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

View cluster (53 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 40-229
PDB
Domain cluster: rep: ankyrin_repeat_protein__YP_009119528__Pandoravirus_inopinatum__1605721__D86-122_169-278
D2 medium residues 230-304
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6tblB01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.59 51.0 4.55e-01 100.0% 82.0%
4xvxA01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.58 42.0 3.71e-01 76.0% 73.9%
2mx8A01 1.10.274.70 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain 0.56 40.0 3.56e-01 76.0% 79.6%
4m9aA01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.56 40.0 3.50e-01 76.0% 68.1%
2pg0A01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.55 38.0 3.35e-01 73.3% 71.8%
4ocqA01 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.54 45.0 3.30e-01 97.3% 100.0%
2pusA04 6.10.140.300 Special › Helix non-globular › Helix Hairpins › 0.54 40.0 3.60e-01 78.7% 90.7%
5xdcB01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.52 37.0 3.37e-01 77.3% 75.7%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3581139 131.1.1.1 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › PDEase_I 0.59 41.0 3.06e-01 73.3% 93.0%
3188291 5059.1.1.0 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter 0.58 44.0 3.02e-01 84.0% 74.7%
4890285 109.4.1.1283 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_PBS, HEAT_2 0.56 41.0 4.22e-01 81.3% 85.9%
3683441 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 45.0 3.34e-01 97.3% 87.2%
3577291 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 47.0 4.00e-01 100.0% 68.5%
3613860 601.1.2.105 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Transmemb_17 0.52 37.0 3.09e-01 100.0% 41.4%
3348499 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.50 41.0 3.86e-01 100.0% 72.0%
D3 medium residues 305-425
PDB
Domain cluster: rep: hypothetical_protein_pdul_cds_649__YP_009430244__Pandoravirus_dulcis__1349409__D429-539
D4 medium residues 426-525
PDB