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hypothetical_protein_psal_cds_948

Euk-Vir

Pandoravirus_salinus

hypothetical_protein_psal_cds_948__YP_008438168__Pandoravirus_salinus__1349410

Identity

Accession:
YP_008438168 ↗
Protein ID:
hypothetical_protein_psal_cds_948
Kingdom:
euk

Quality

75.3 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-133
PDB
Domain cluster: rep: hypothetical_protein_pneo_cds_980__YP_009482590__Pandoravirus_neocaledonia__2107708__D88-215
D2 medium residues 134-269
PDB
Domain cluster: rep: hypothetical_protein_pneo_cds_1058__YP_009482668__Pandoravirus_neocaledonia__2107708__D122-233
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wy6A00 1.25.40.350 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.62 52.0 5.00e-01 99.3% 78.0%
4bszB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.62 57.0 5.57e-01 99.3% 92.0%
4e6hA00 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.53 46.0 3.10e-01 94.9% 62.2%
7c1iA01 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.52 25.0 2.84e-01 75.7% 58.0%
6jpaE00 1.20.140.150 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.50 28.0 2.63e-01 72.1% 42.0%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3184570 109.3.1.10 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_4 0.66 60.0 4.42e-01 99.3% 51.7%
4634 109.9.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Hypothetical protein ST1625 › Hypothetical protein ST1625 › DUF1955 0.62 52.0 5.00e-01 99.3% 78.0%
3259836 109.3.1.171 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 0.59 50.0 5.18e-01 93.4% 99.2%
3175789 603.1.1.209 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF28401 0.52 36.0 3.48e-01 71.3% 93.5%
D3 medium residues 270-358_373-406
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ciaA04 1.25.40.320 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal domain 0.65 47.0 4.50e-01 95.9% 65.0%
2qk2A01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.60 54.0 4.41e-01 100.0% 53.8%
4wz9A04 1.25.50.20 Mainly Alpha › Alpha Horseshoe › Zincin-like fold › 0.60 53.0 3.90e-01 100.0% 36.8%
4dloB02 1.25.40.610 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 48.0 4.92e-01 89.4% 91.5%
2ebfX02 1.20.140.180 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.59 38.0 3.65e-01 70.7% 55.2%
2lhrA00 1.20.58.1270 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 32.0 3.87e-01 86.2% 82.1%
2b1eA02 1.20.1310.30 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › 0.59 51.0 4.83e-01 95.9% 100.0%
1elkA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.57 51.0 4.76e-01 100.0% 86.9%
4n1yB00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.57 39.0 3.21e-01 70.7% 83.3%
7cc7A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.56 51.0 4.21e-01 100.0% 67.4%
1s2xA00 1.20.190.30 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › CAG pathogenicity island protein, CagZ 0.56 41.0 3.66e-01 77.2% 95.6%
3mkqA03 1.25.40.470 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.56 38.0 3.21e-01 94.3% 40.1%
3ztaA00 1.10.490.130 Mainly Alpha › Orthogonal Bundle › Globin-like › 0.55 45.0 4.37e-01 87.8% 85.6%
2dg8D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 44.0 3.97e-01 89.4% 88.4%
3vprA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 38.0 3.69e-01 74.8% 74.5%
1zu2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 46.0 4.25e-01 95.1% 84.8%
5bp8A01 1.50.10.160 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.53 46.0 3.85e-01 97.6% 59.5%
4i9cA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 46.0 3.86e-01 100.0% 57.0%
8jpdG01 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.51 34.0 3.26e-01 95.1% 57.9%
3h9pA00 1.10.4200.10 Mainly Alpha › Orthogonal Bundle › Triphosphoribosyl-dephospho-CoA protein › Triphosphoribosyl-dephospho-CoA protein 0.51 37.0 3.09e-01 76.4% 54.0%
2xpzA04 1.25.40.320 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal domain 0.51 45.0 4.13e-01 100.0% 79.4%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4436319 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 55.0 4.51e-01 100.0% 51.4%
3826145 1065.1.1.1 ↗ alpha bundles › SPX domain › SPX domain › SPX domain › SPX 0.63 45.0 3.66e-01 74.0% 79.6%
2582320 603.4.1.1 ↗ alpha bundles › STAT-like › Cag-Z › Cag-Z › CagZ 0.61 44.0 3.74e-01 74.0% 87.5%
5050223 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 55.0 4.45e-01 100.0% 64.4%
3786280 109.4.1.70 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID 0.60 53.0 5.22e-01 100.0% 92.3%
3729025 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 43.0 4.15e-01 90.2% 65.5%
3487574 188.1.1.1 ↗ alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep 0.59 41.0 3.35e-01 72.4% 85.5%
3669250 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.58 53.0 4.81e-01 100.0% 77.6%
4027261 109.4.1.916 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_COPA_B 0.58 42.0 3.42e-01 99.2% 38.0%
3193450 109.4.1.356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.57 51.0 3.47e-01 100.0% 39.2%
3894673 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.56 40.0 2.88e-01 73.2% 62.2%
4200809 603.1.1.9 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › COG2p_C 0.54 40.0 3.65e-01 76.4% 66.3%
5055844 109.4.1.210 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 0.53 46.0 4.36e-01 100.0% 78.7%
5072892 601.28.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like 0.52 36.0 4.04e-01 87.0% 92.6%
4258357 109.4.1.206 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › YfiO 0.51 44.0 4.02e-01 96.7% 73.9%