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hypothetical_protein_psal_cds_977
Euk-VirPandoravirus_salinus
hypothetical_protein_psal_cds_977__YP_008438212__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_008438212 ↗
- Protein ID:
- hypothetical_protein_psal_cds_977
- Kingdom:
- euk
Quality
78.7
mean pLDDT
Cluster
View cluster (14 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 191-249
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pubA01 | 1.10.10.2400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain | 0.73 | 62.0 | 5.75e-01 | 93.2% | 90.5% |
| 3od1A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.56 | 44.0 | 2.80e-01 | 84.7% | 35.6% |
| 2o57A01 | 1.10.287.840 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mycolic acid cyclopropane synthase domain like | 0.55 | 41.0 | 3.54e-01 | 84.7% | 84.8% |
| 3ls1A00 | 1.20.120.290 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle | 0.52 | 44.0 | 3.34e-01 | 91.5% | 59.4% |
| 2lpeA02 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.50 | 37.0 | 3.60e-01 | 84.7% | 80.3% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3483336 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.87 | 77.0 | 5.99e-01 | 96.6% | 51.7% |
| 3747140 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.85 | 76.0 | 5.63e-01 | 96.6% | 42.9% |
| 3605287 | 109.3.1.165 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4, Ank_5 | 0.84 | 75.0 | 4.75e-01 | 96.6% | 22.2% |
| 3560377 | 109.3.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 | 0.79 | 67.0 | 5.19e-01 | 93.2% | 47.2% |
D2
medium
residues 250-386