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hypothetical_protein_psal_cds_981

Euk-Vir

Pandoravirus_salinus

hypothetical_protein_psal_cds_981__YP_008438216__Pandoravirus_salinus__1349410

Identity

Accession:
YP_008438216 ↗
Protein ID:
hypothetical_protein_psal_cds_981
Kingdom:
euk

Quality

70.4 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-84
PDB
Domain cluster: rep: hypothetical_protein_pneo_cds_979__YP_009482589__Pandoravirus_neocaledonia__2107708__D6-77
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19255.5 best DUF5902 123.6 5.50e-36 98.6% 69.2%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ovrB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.79 50.0 4.73e-01 100.0% 54.0%
1fs2A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.77 48.0 3.22e-01 100.0% 17.8%
3ajcA01 1.10.220.30 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain 0.69 48.0 4.26e-01 94.5% 51.0%
1na6B02 3.40.91.80 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.52 39.0 2.91e-01 84.9% 43.9%
6ocxA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.51 38.0 3.04e-01 80.8% 45.9%
6mcjA00 1.10.2090.10 Mainly Alpha › Orthogonal Bundle › orange carotenoid protein, domain 2 › Orange carotenoid-binding protein, N-terminal domain 0.51 41.0 3.23e-01 93.2% 43.4%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3427479 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.88 49.0 5.61e-01 98.6% 74.5%
3811913 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.87 51.0 6.04e-01 100.0% 86.0%
3731257 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 47.0 6.01e-01 90.4% 97.5%
3694013 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.85 54.0 4.85e-01 100.0% 48.0%
3233030 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.84 47.0 5.95e-01 94.5% 100.0%
3728200 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 54.0 5.54e-01 100.0% 68.6%
3208252 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.84 55.0 4.88e-01 100.0% 49.0%
3276040 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 54.0 5.51e-01 100.0% 68.6%
3697864 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 53.0 4.65e-01 100.0% 45.7%
3491937 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 53.0 4.90e-01 100.0% 53.3%
3939710 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.82 50.0 5.25e-01 100.0% 69.2%
3547224 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 52.0 4.98e-01 100.0% 56.5%
3445366 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.81 45.0 5.76e-01 97.3% 100.0%
3821430 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 52.0 5.07e-01 100.0% 60.0%
3672250 207.1.1.116 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_FBXL15 0.81 49.0 3.55e-01 100.0% 23.7%
3646855 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 49.0 6.12e-01 97.3% 100.0%
3203933 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.81 52.0 4.65e-01 100.0% 48.0%
3681526 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 48.0 5.62e-01 95.9% 88.0%
3631996 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.79 52.0 4.83e-01 100.0% 54.4%
3651806 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.78 50.0 4.91e-01 100.0% 60.0%
3664817 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 47.0 4.63e-01 97.3% 57.5%
3736866 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.76 50.0 4.23e-01 100.0% 41.7%
3245054 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.75 54.0 6.06e-01 78.1% 100.0%
3685862 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.74 48.0 5.51e-01 100.0% 96.0%
3542973 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.70 52.0 3.31e-01 79.5% 27.1%
3454205 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.68 51.0 3.11e-01 78.1% 29.2%
3515309 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.68 51.0 3.14e-01 78.1% 37.2%
3176338 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.67 58.0 5.63e-01 100.0% 87.5%
3682581 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.66 50.0 2.99e-01 79.5% 30.1%
3473623 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.66 57.0 5.51e-01 100.0% 84.7%
3446890 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.65 46.0 4.83e-01 100.0% 81.5%
3803880 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.64 48.0 3.01e-01 79.5% 29.1%
3337545 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.64 51.0 5.37e-01 98.6% 100.0%
3815857 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.64 48.0 2.92e-01 79.5% 31.5%
3738910 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.63 56.0 5.34e-01 100.0% 85.9%
3643181 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.63 54.0 5.41e-01 100.0% 90.7%
3781279 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.62 55.0 5.40e-01 100.0% 92.5%
None — 0.62 48.0 2.91e-01 82.2% 27.7%
None — 0.61 55.0 3.37e-01 100.0% 22.3%
3328883 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.61 54.0 5.29e-01 100.0% 96.2%
3812507 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.61 54.0 5.03e-01 100.0% 91.4%
3901480 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.61 54.0 5.27e-01 100.0% 90.0%
4019682 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.61 53.0 4.90e-01 100.0% 87.4%
3311874 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.61 54.0 5.44e-01 100.0% 100.0%
3312720 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.60 52.0 5.19e-01 95.9% 97.3%
3447143 145.1.1.45 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › LRR_At1g61320_AtMIF1, LRR_At5g56370 0.60 54.0 3.30e-01 100.0% 26.2%
3200311 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.60 52.0 5.07e-01 100.0% 93.8%
3920713 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.60 52.0 3.18e-01 100.0% 17.0%
3664299 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.59 53.0 4.84e-01 100.0% 90.5%
3675534 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.59 52.0 5.07e-01 100.0% 90.0%
3346715 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.59 53.0 5.34e-01 100.0% 97.3%
3903969 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.59 52.0 4.92e-01 100.0% 82.2%
3355293 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.59 52.0 4.74e-01 100.0% 97.0%
3726236 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.59 51.0 4.89e-01 100.0% 89.4%
3879992 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.59 53.0 5.19e-01 100.0% 92.5%
3446581 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.59 52.0 5.01e-01 100.0% 96.5%
3575456 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.59 50.0 4.72e-01 100.0% 94.4%
3770072 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.59 51.0 4.78e-01 100.0% 78.9%
3184741 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.59 52.0 4.57e-01 100.0% 92.7%
3348915 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.59 52.0 4.54e-01 100.0% 80.0%
3259075 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.59 52.0 5.06e-01 94.5% 92.3%
3731690 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.58 50.0 4.92e-01 100.0% 96.2%
3655623 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.58 52.0 4.44e-01 98.6% 91.3%
3648014 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.58 50.0 4.99e-01 100.0% 97.3%
3328089 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.58 51.0 3.21e-01 100.0% 27.3%
3300713 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.58 51.0 5.13e-01 100.0% 98.7%
3301272 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.58 50.0 4.44e-01 100.0% 65.5%
3646821 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.58 51.0 5.10e-01 100.0% 97.3%
3204462 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.58 50.0 4.26e-01 100.0% 84.0%
3323668 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.58 51.0 5.14e-01 100.0% 97.3%
3726578 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.58 51.0 4.90e-01 100.0% 85.9%
3352484 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.58 51.0 3.23e-01 98.6% 100.0%
3355899 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.58 52.0 4.94e-01 100.0% 97.6%
3430031 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.57 50.0 4.44e-01 100.0% 96.4%
3210778 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.57 50.0 5.02e-01 100.0% 98.7%
3523576 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.57 50.0 4.78e-01 100.0% 85.9%
3730967 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.57 51.0 4.53e-01 100.0% 74.3%
3617852 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.57 49.0 5.05e-01 100.0% 100.0%
3273645 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.57 49.0 4.82e-01 100.0% 97.5%
3317266 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.57 52.0 3.27e-01 100.0% 38.6%
3221696 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.57 42.0 2.69e-01 80.8% 26.8%
None — 0.57 48.0 3.02e-01 97.3% 23.5%
3424908 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.57 49.0 4.35e-01 97.3% 96.3%
3176493 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.56 49.0 4.41e-01 100.0% 90.5%
3817535 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.56 51.0 3.26e-01 100.0% 32.8%
3808706 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.56 51.0 3.12e-01 100.0% 28.8%
3812115 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.56 47.0 4.78e-01 94.5% 98.6%
4022899 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.56 50.0 4.49e-01 100.0% 81.0%
3425357 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.56 48.0 4.78e-01 100.0% 96.2%
3449875 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.55 48.0 3.68e-01 100.0% 43.9%
3300009 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.55 49.0 4.81e-01 100.0% 90.0%
3344543 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.55 48.0 4.59e-01 100.0% 91.8%
3337395 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.55 49.0 3.00e-01 100.0% 23.8%
3845951 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.54 47.0 4.47e-01 95.9% 84.7%
3363836 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.54 46.0 4.42e-01 100.0% 92.9%
3666811 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.54 48.0 4.07e-01 100.0% 87.5%
3468667 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.54 49.0 3.24e-01 100.0% 28.3%
3299128 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.54 47.0 4.26e-01 100.0% 98.0%
3188576 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.53 46.0 4.44e-01 100.0% 92.9%
D2 high residues 87-117_141-307
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 20.0 3.26e-01 98.5% 80.5%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3803027 387.1.5.0 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like 0.61 18.0 3.37e-01 75.3% 90.7%