hypothetical_protein_psal_cds_997

Euk-Vir

Pandoravirus_salinus

hypothetical_protein_psal_cds_997__YP_008438238__Pandoravirus_salinus__1349410

Identity

66.3 mean pLDDT

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

View cluster (25 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 31-52_101-171

PDB

Domain cluster: rep: hypothetical_protein_pneo_cds_779__YP_009482389__Pandoravirus_neocaledonia__2107708__D1-72

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1fs2A00	3.80.10.10	Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor	0.58	42.0	3.02e-01	76.3%	30.5%
2rg8A00	1.25.40.180	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.54	40.0	3.54e-01	82.8%	82.7%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3399970	207.1.1.79 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box	0.68	46.0	3.32e-01	86.0%	26.2%
None	—		0.66	48.0	2.97e-01	76.3%	88.7%
3816173	145.1.1.0 ↗	alpha arrays › F-box domain › F-box domain › F-box domain	0.56	38.0	2.47e-01	76.3%	14.9%
3221696	207.1.1.0 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats	0.53	36.0	2.46e-01	72.0%	43.5%
None	—		0.53	36.0	2.36e-01	71.0%	42.6%
4012742	5069.1.1.0 ↗	alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes	0.50	40.0	2.96e-01	87.1%	76.2%

D2 medium residues 234-349

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3rssA02	3.40.1190.20	Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase	0.52	44.0	3.44e-01	98.3%	79.5%
3zibC00	1.20.120.1620	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.52	35.0	3.82e-01	75.9%	83.3%
1y8qD02	1.10.10.520	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ubiquitin activating enzymes (Uba3). Chain: B, domain 2	0.51	44.0	3.79e-01	95.7%	86.8%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3585078	109.4.1.33 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT	0.53	39.0	3.13e-01	77.6%	47.5%