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hypothetical_protein_pv_103

Euk-Vir

Pithovirus_sibericum

hypothetical_protein_pv_103__YP_009001005__Pithovirus_sibericum__1450746

Identity

Accession:
YP_009001005 ↗
Protein ID:
hypothetical_protein_pv_103
Kingdom:
euk

Quality

47.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 9-61
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF12937.13 best F-box-like 31.9 1.20e-07 81.1% 89.4%
PF00646.39 F-box 34.3 2.10e-08 75.5% 90.7%
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ovrB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.88 71.0 5.95e-01 86.8% 52.9%
5ibkB00 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.85 60.0 6.38e-01 77.4% 84.8%
3v7dD01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.84 75.0 6.03e-01 100.0% 56.0%
2p1oB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.82 55.0 6.22e-01 71.7% 97.4%
6m90A01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.77 66.0 5.45e-01 100.0% 69.7%
3l2oB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.75 65.0 5.53e-01 100.0% 73.9%
1fs2A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.70 63.0 3.99e-01 100.0% 36.3%
2e31A01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.68 59.0 5.68e-01 100.0% 85.5%
1dd3A01 1.20.5.710 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Single helix bin 0.68 55.0 5.38e-01 90.6% 96.5%
1vmgA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.67 45.0 3.99e-01 71.7% 73.2%
4by6B00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.67 49.0 3.48e-01 79.2% 25.3%
2kjgA00 1.20.120.970 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.64 49.0 4.15e-01 88.7% 59.6%
4c0dC00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.60 44.0 3.27e-01 79.2% 30.3%
6srbA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.58 45.0 3.64e-01 88.7% 61.5%
5jpnB01 1.20.91.20 Mainly Alpha › Up-down Bundle › Influenza Virus Matrix Protein; Chain A, domain 1 › Anaphylotoxins (complement system) 0.55 42.0 3.95e-01 90.6% 68.1%
3pivA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.55 42.0 3.15e-01 88.7% 81.4%
3ce2A01 1.20.140.70 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Oligopeptidase f, N-terminal domain 0.54 40.0 3.05e-01 88.7% 63.0%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 36.0 3.38e-01 73.6% 56.3%
2blfB01 1.10.760.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain 0.52 37.0 3.56e-01 77.4% 77.8%
2d3dA00 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.52 40.0 3.56e-01 90.6% 73.5%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3248494 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.92 80.0 7.39e-01 92.5% 75.4%
3276040 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.92 77.0 6.88e-01 88.7% 67.1%
3443639 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.92 75.0 7.72e-01 86.8% 92.0%
3194125 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.90 80.0 6.84e-01 100.0% 63.7%
3350782 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.90 82.0 4.92e-01 100.0% 17.4%
3646821 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 82.0 7.17e-01 100.0% 73.3%
3363533 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 81.0 7.17e-01 100.0% 76.0%
3301272 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 81.0 6.26e-01 100.0% 50.0%
3903969 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 81.0 6.68e-01 100.0% 60.0%
3613821 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 77.0 6.95e-01 100.0% 71.4%
3261282 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 81.0 8.04e-01 100.0% 96.4%
3845951 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 80.0 6.71e-01 98.1% 62.4%
3201568 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 70.0 6.31e-01 84.9% 64.3%
3664817 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 80.0 6.89e-01 100.0% 72.5%
3770072 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 80.0 6.64e-01 100.0% 60.0%
3446581 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 80.0 6.77e-01 100.0% 75.3%
3407033 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 80.0 7.08e-01 100.0% 70.7%
3300009 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 76.0 6.57e-01 100.0% 62.5%
3762363 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.88 77.0 4.34e-01 96.2% 9.1%
3726840 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 82.0 7.13e-01 100.0% 70.7%
3901480 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 79.0 6.83e-01 100.0% 67.5%
3644704 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 78.0 6.64e-01 100.0% 65.9%
3308939 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.87 79.0 7.00e-01 100.0% 74.7%
3617852 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 79.0 7.15e-01 100.0% 75.7%
3711287 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.87 75.0 5.92e-01 100.0% 48.1%
3547224 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 78.0 6.64e-01 100.0% 62.4%
3250247 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 69.0 6.66e-01 86.8% 76.7%
3698023 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 76.0 5.81e-01 100.0% 44.3%
4545458 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 78.0 6.28e-01 100.0% 53.0%
3812206 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.86 79.0 6.93e-01 100.0% 74.7%
4023099 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 79.0 6.02e-01 100.0% 47.0%
3652521 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 79.0 7.03e-01 100.0% 76.7%
4023603 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 81.0 7.24e-01 100.0% 78.6%
4013644 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.86 75.0 6.16e-01 94.3% 66.7%
3821430 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 79.0 6.81e-01 100.0% 66.3%
3806475 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 78.0 6.91e-01 100.0% 72.0%
3358453 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 80.0 7.20e-01 100.0% 77.1%
3257387 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 78.0 6.59e-01 100.0% 63.5%
3425357 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.86 77.0 6.75e-01 100.0% 71.8%
3685535 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 78.0 6.73e-01 100.0% 72.5%
3344543 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.86 78.0 6.60e-01 100.0% 64.7%
4019682 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 76.0 6.25e-01 100.0% 70.5%
3742900 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 78.0 5.68e-01 100.0% 40.0%
3472074 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 76.0 6.25e-01 100.0% 56.8%
3654886 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 77.0 6.84e-01 100.0% 70.7%
3685160 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 76.0 6.40e-01 100.0% 61.2%
3320433 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.85 74.0 7.10e-01 98.1% 85.0%
4500280 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 72.0 6.08e-01 92.5% 67.1%
3536855 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 78.0 6.30e-01 100.0% 69.5%
3879992 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 77.0 6.66e-01 100.0% 71.2%
3810074 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.85 77.0 6.65e-01 100.0% 70.9%
3485475 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 72.0 6.14e-01 100.0% 58.8%
3726578 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 75.0 6.42e-01 100.0% 68.2%
3643181 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 74.0 6.58e-01 100.0% 69.3%
3380116 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 75.0 6.93e-01 100.0% 79.4%
3301883 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 74.0 6.47e-01 100.0% 68.8%
3696138 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 75.0 6.17e-01 100.0% 68.4%
3235397 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.84 72.0 6.92e-01 100.0% 83.3%
3363836 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 77.0 6.45e-01 100.0% 64.7%
3455034 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.84 65.0 6.89e-01 83.0% 100.0%
4022899 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 76.0 6.06e-01 100.0% 62.0%
3730967 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 76.0 5.98e-01 100.0% 60.0%
3699732 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 76.0 6.88e-01 100.0% 75.7%
3429995 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 74.0 6.64e-01 100.0% 71.2%
3522358 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 74.0 6.58e-01 100.0% 72.0%
3272348 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 73.0 5.84e-01 100.0% 61.9%
3355899 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 74.0 6.30e-01 100.0% 78.8%
3256545 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 73.0 6.87e-01 100.0% 89.2%
3191118 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 76.0 5.98e-01 100.0% 51.5%
3254943 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 63.0 6.49e-01 83.0% 88.0%
3209791 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 72.0 6.71e-01 100.0% 80.0%
3617289 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 74.0 7.08e-01 100.0% 91.7%
3803973 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 73.0 6.62e-01 100.0% 81.4%
3715255 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 72.0 7.14e-01 100.0% 94.5%
3595717 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.81 68.0 6.39e-01 94.3% 76.9%
3428197 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.81 71.0 6.17e-01 100.0% 65.0%
3312720 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.81 71.0 6.35e-01 100.0% 70.7%
3861026 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 70.0 5.72e-01 100.0% 54.1%
3818741 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.79 64.0 6.17e-01 88.7% 78.3%
3726236 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.79 69.0 5.96e-01 100.0% 68.2%
3301911 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 70.0 5.93e-01 100.0% 61.2%
3187719 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 69.0 6.19e-01 100.0% 73.3%
3691218 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 68.0 6.75e-01 100.0% 94.5%
3834246 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.78 66.0 6.55e-01 92.5% 89.1%
4021336 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.78 65.0 6.27e-01 90.6% 83.3%
3781279 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 68.0 5.96e-01 100.0% 70.0%
3731690 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.78 68.0 5.99e-01 100.0% 72.5%
3259869 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 67.0 5.82e-01 100.0% 62.4%
3819291 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.78 59.0 5.91e-01 83.0% 83.6%
3194725 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 68.0 5.80e-01 100.0% 72.9%
3466887 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.77 59.0 6.10e-01 88.7% 92.0%
3451260 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 64.0 6.15e-01 92.5% 85.0%
3189083 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.76 67.0 6.00e-01 100.0% 70.7%
3507975 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.76 66.0 4.08e-01 100.0% 18.4%
3454872 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.74 58.0 5.94e-01 84.9% 92.0%
3738910 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.74 65.0 5.57e-01 100.0% 70.6%
3810743 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.73 60.0 3.92e-01 94.3% 28.6%
3473623 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.72 63.0 5.42e-01 100.0% 65.9%
3427473 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.72 55.0 5.47e-01 83.0% 80.0%
3456664 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.72 55.0 5.52e-01 86.8% 89.1%
D2 medium residues 62-254
PDB