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hypothetical_protein_pv_148

Euk-Vir

Pithovirus_sibericum

hypothetical_protein_pv_148__YP_009001050__Pithovirus_sibericum__1450746

Identity

Accession:
YP_009001050 ↗
Protein ID:
hypothetical_protein_pv_148
Kingdom:
euk

Quality

65.1 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Pithoviridae› Alphapithovirus› Pithovirus_sibericum

TaxID: 1450746

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 9-119
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5mj6A04 1.25.50.20 Mainly Alpha › Alpha Horseshoe › Zincin-like fold › 0.53 42.0 2.99e-01 83.8% 64.7%
3nowA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.51 45.0 3.22e-01 100.0% 57.5%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3477761 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.61 41.0 4.55e-01 84.7% 89.4%
3637559 109.4.1.146 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cohesin_load 0.58 51.0 4.01e-01 99.1% 60.8%
3554027 109.4.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm 0.57 50.0 4.25e-01 100.0% 76.2%
3468670 109.4.1.3 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm,Arm_3 0.55 49.0 3.96e-01 100.0% 74.4%
3364217 109.4.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm 0.54 48.0 4.31e-01 98.2% 88.2%
4946833 109.4.1.1173 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PCI 0.51 45.0 3.52e-01 100.0% 61.2%
D2 medium residues 123-203
PDB