←Back to structures
hypothetical_protein_pv_163
Euk-VirPithovirus_sibericum
hypothetical_protein_pv_163__YP_009001065__Pithovirus_sibericum__1450746
Identity
- Accession:
- YP_009001065 ↗
- Protein ID:
- hypothetical_protein_pv_163
- Kingdom:
- euk
Quality
70.1
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Pithoviridae›
Alphapithovirus›
Pithovirus_sibericum
TaxID: 1450746
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 111-227
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zgdA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.73 | 54.0 | 5.86e-01 | 93.2% | 91.8% |
| 6ghmC01 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.68 | 59.0 | 5.61e-01 | 100.0% | 80.6% |
| 6if3A00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.68 | 58.0 | 5.16e-01 | 97.4% | 66.7% |
| 2ajaA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.65 | 61.0 | 4.27e-01 | 100.0% | 38.8% |
| 1wdyA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.64 | 60.0 | 4.40e-01 | 100.0% | 45.3% |
| 3keaA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.64 | 57.0 | 4.24e-01 | 100.0% | 39.6% |
| 3uxgA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.63 | 57.0 | 5.07e-01 | 99.1% | 69.3% |
| 2ibdA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.62 | 44.0 | 4.08e-01 | 72.6% | 66.0% |
| 5aarA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.62 | 54.0 | 4.64e-01 | 100.0% | 60.5% |
| 4zhbA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.61 | 50.0 | 5.26e-01 | 98.3% | 98.1% |
| 2fd5A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 43.0 | 4.18e-01 | 72.6% | 68.2% |
| 4mo7A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 40.0 | 3.77e-01 | 70.9% | 69.0% |
| 1fx8A00 | 1.20.1080.10 | Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. | 0.57 | 40.0 | 3.20e-01 | 74.4% | 77.6% |
| 1b89A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 47.0 | 3.42e-01 | 99.1% | 34.5% |
| 1tqgA00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.54 | 32.0 | 3.41e-01 | 87.2% | 63.8% |
| 1paqA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 46.0 | 4.18e-01 | 95.7% | 85.7% |
| 7zcvA02 | 1.25.40.400 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 46.0 | 3.89e-01 | 100.0% | 83.8% |
| 1olmC01 | 3.40.525.10 | Alpha Beta › 3-Layer(aba) Sandwich › Phosphatidylinositol Transfer Protein Sec14p › CRAL-TRIO lipid binding domain | 0.52 | 45.0 | 3.47e-01 | 99.1% | 50.5% |
| 5af7A01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.51 | 36.0 | 3.74e-01 | 72.6% | 78.2% |
| 4rg9B01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 41.0 | 3.72e-01 | 100.0% | 63.5% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3267273 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.78 | 59.0 | 6.00e-01 | 100.0% | 80.0% |
| 3370231 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.75 | 61.0 | 6.03e-01 | 99.1% | 80.6% |
| 3733315 | 109.3.1.166 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3 | 0.75 | 56.0 | 4.72e-01 | 98.3% | 47.4% |
| 3437396 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.74 | 57.0 | 4.75e-01 | 96.6% | 48.9% |
| 3195802 | 109.3.1.186 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_5 | 0.70 | 57.0 | 4.35e-01 | 99.1% | 38.8% |
| 3259402 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.69 | 56.0 | 3.74e-01 | 100.0% | 23.5% |
| 3259554 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.69 | 57.0 | 4.52e-01 | 98.3% | 44.8% |
| 3695738 | 109.3.1.232 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_KRIT1 | 0.66 | 57.0 | 3.88e-01 | 99.1% | 26.7% |
| 3247851 | 109.3.1.33 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_3 | 0.66 | 61.0 | 5.46e-01 | 100.0% | 72.5% |
| 3255754 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.66 | 61.0 | 4.08e-01 | 100.0% | 40.0% |
| 3198211 | 109.3.1.347 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_KRIT1 | 0.64 | 57.0 | 3.97e-01 | 99.1% | 30.8% |
| 3683629 | 109.3.1.188 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF28568 | 0.64 | 60.0 | 4.04e-01 | 100.0% | 36.6% |
| 3272965 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.64 | 54.0 | 5.69e-01 | 97.4% | 100.0% |
| 3724861 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.63 | 57.0 | 4.07e-01 | 100.0% | 46.3% |
| 3915303 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.62 | 57.0 | 4.67e-01 | 100.0% | 67.6% |
| 3486873 | 109.3.1.166 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3 | 0.62 | 56.0 | 5.07e-01 | 100.0% | 90.6% |
| 4280619 | 109.4.1.1253 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_Atp25_C | 0.62 | 56.0 | 4.07e-01 | 99.1% | 38.7% |
| 3224280 | 109.3.1.200 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, TRP_2, Ank_4 | 0.62 | 56.0 | 4.65e-01 | 100.0% | 86.3% |
| 3501732 | 109.3.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank | 0.60 | 55.0 | 4.92e-01 | 100.0% | 95.2% |
| 3463299 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.60 | 51.0 | 4.92e-01 | 97.4% | 82.3% |
| 3301042 | 109.4.1.1272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif | 0.59 | 52.0 | 3.78e-01 | 100.0% | 34.5% |
| 3327011 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.59 | 48.0 | 4.90e-01 | 98.3% | 93.6% |
| 3824817 | 109.4.1.1257 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 | 0.59 | 43.0 | 4.62e-01 | 96.6% | 92.0% |
| 3678516 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.59 | 45.0 | 4.48e-01 | 97.4% | 77.6% |
| 3828676 | 109.4.1.1257 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 | 0.59 | 45.0 | 4.66e-01 | 100.0% | 91.4% |
| 3378605 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.58 | 48.0 | 3.47e-01 | 97.4% | 31.2% |
| 3325706 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.58 | 48.0 | 4.37e-01 | 100.0% | 66.3% |
| 3669624 | 109.4.1.1293 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1 | 0.58 | 45.0 | 4.10e-01 | 100.0% | 60.6% |
| 3352830 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.57 | 47.0 | 4.56e-01 | 98.3% | 79.3% |
| 3837917 | 109.4.1.1908 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long, E_motif | 0.57 | 47.0 | 3.97e-01 | 97.4% | 53.0% |
| 3353773 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.57 | 46.0 | 4.30e-01 | 98.3% | 71.0% |
| 3826131 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.57 | 45.0 | 3.19e-01 | 100.0% | 26.2% |
| 3370621 | 109.4.1.1279 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long, TPR_24 | 0.56 | 51.0 | 4.64e-01 | 100.0% | 80.6% |
| 3299887 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.56 | 45.0 | 4.56e-01 | 100.0% | 87.5% |
| 4584852 | 109.4.1.923 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › AEP1 | 0.55 | 48.0 | 4.24e-01 | 99.1% | 72.2% |
| 3836656 | 109.4.1.1290 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_19 | 0.55 | 48.0 | 3.63e-01 | 100.0% | 42.4% |
| 3661675 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.55 | 45.0 | 4.36e-01 | 100.0% | 81.5% |
| 3657263 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.55 | 47.0 | 4.39e-01 | 100.0% | 76.6% |
| 3813373 | 109.4.1.1331 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long, E_motif | 0.54 | 48.0 | 3.09e-01 | 100.0% | 23.9% |
| 3311781 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.54 | 48.0 | 3.28e-01 | 100.0% | 37.8% |
| 3677513 | 109.4.1.1295 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, TPR_24 | 0.54 | 48.0 | 3.47e-01 | 100.0% | 35.0% |
| 3468311 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.53 | 47.0 | 3.39e-01 | 100.0% | 38.3% |
| 3683390 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.53 | 44.0 | 4.24e-01 | 97.4% | 79.3% |
| 3310176 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.53 | 44.0 | 4.03e-01 | 97.4% | 67.5% |
| 3671718 | 109.4.1.2659 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, DYW_deaminase, E_motif, TPR_24 | 0.53 | 47.0 | 2.92e-01 | 100.0% | 20.3% |
| 3808016 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.53 | 45.0 | 4.54e-01 | 99.1% | 94.2% |
| 3684300 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.52 | 47.0 | 3.66e-01 | 100.0% | 55.7% |
| 3464798 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.52 | 47.0 | 4.16e-01 | 100.0% | 80.6% |
| 3420651 | 109.4.1.1521 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, DYW_deaminase, Eplus_motif, E_motif | 0.52 | 45.0 | 3.28e-01 | 100.0% | 33.5% |
| 3436209 | 109.4.1.1272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif | 0.52 | 46.0 | 3.40e-01 | 100.0% | 43.3% |
| 3350919 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.51 | 45.0 | 3.80e-01 | 100.0% | 57.5% |
D2
medium
residues 336-447