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hypothetical_protein_pv_182
Euk-VirPithovirus_sibericum
hypothetical_protein_pv_182__YP_009001084__Pithovirus_sibericum__1450746
Identity
- Accession:
- YP_009001084 ↗
- Protein ID:
- hypothetical_protein_pv_182
- Kingdom:
- euk
Quality
72.3
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Pithoviridae›
Alphapithovirus›
Pithovirus_sibericum
TaxID: 1450746
Cluster
View cluster (39 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-99
Domain cluster:
rep: hypothetical_protein_pv_328__YP_009001230__Pithovirus_sibericum__1450746__D13-91
D2
high
residues 104-168
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zgdA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.69 | 57.0 | 4.97e-01 | 100.0% | 59.8% |
| 2i2xB01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.69 | 62.0 | 5.34e-01 | 100.0% | 75.0% |
| 3ehrA02 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.67 | 53.0 | 4.36e-01 | 96.9% | 48.3% |
| 4qfvC02 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.67 | 53.0 | 5.40e-01 | 98.5% | 87.7% |
| 5eidA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.62 | 56.0 | 4.48e-01 | 100.0% | 52.8% |
| 4uucA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.61 | 54.0 | 3.70e-01 | 100.0% | 29.0% |
| 5ja4D00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.58 | 49.0 | 3.91e-01 | 100.0% | 53.0% |
| 3hjlA01 | 1.10.220.30 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain | 0.57 | 47.0 | 4.29e-01 | 90.8% | 90.6% |
| 2b6cA01 | 1.20.1660.10 | Mainly Alpha › Up-down Bundle › ARM repeat fold › Hypothetical protein (EF3068) | 0.53 | 46.0 | 3.86e-01 | 100.0% | 61.2% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4070707 | 176.1.1.0 ↗ | alpha arrays › Annexin › Annexin › Annexin | 0.54 | 46.0 | 4.54e-01 | 100.0% | 94.3% |
| 4982785 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.53 | 45.0 | 3.93e-01 | 100.0% | 79.0% |
| 4179237 | 6028.1.1.0 ↗ | alpha bundles › Ribosome modulation factor › Ribosome modulation factor › Ribosome modulation factor | 0.52 | 39.0 | 4.00e-01 | 84.6% | 84.6% |
| 3500015 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.51 | 36.0 | 3.11e-01 | 80.0% | 71.7% |
| 3384455 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.50 | 40.0 | 3.07e-01 | 95.4% | 93.0% |
D3
medium
residues 198-313
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3o4zA02 | 1.25.40.720 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tel2 C-terminal domain | 0.62 | 51.0 | 4.37e-01 | 91.4% | 73.7% |
| 2a2fX02 | 1.20.58.670 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain D | 0.61 | 45.0 | 4.39e-01 | 76.7% | 94.6% |
| 4gyoA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 47.0 | 3.94e-01 | 97.4% | 92.3% |
| 2ynqB00 | 1.25.40.680 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain | 0.51 | 41.0 | 3.74e-01 | 85.3% | 90.7% |
| 3hi0A03 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.51 | 43.0 | 3.67e-01 | 95.7% | 94.5% |
| 2jqqA00 | 1.20.58.1240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 39.0 | 3.58e-01 | 82.8% | 99.4% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3741335 | 109.4.1.338 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIC1 | 0.60 | 49.0 | 3.75e-01 | 91.4% | 52.5% |
| 3676669 | 109.4.1.775 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 49.0 | 4.91e-01 | 90.5% | 97.5% |
| 3699725 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 46.0 | 4.22e-01 | 83.6% | 83.2% |
| 5021493 | 5053.1.1.1 ↗ | alpha complex topology › Clc chloride channel › Clc chloride channel › Clc chloride channel › Voltage_CLC | 0.57 | 48.0 | 3.28e-01 | 91.4% | 90.7% |
D4
medium
residues 337-521
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4leuA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.68 | 57.0 | 5.79e-01 | 96.8% | 91.2% |
| 1h2tC03 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.62 | 56.0 | 5.16e-01 | 99.5% | 90.1% |
| 8g0lB01 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.58 | 48.0 | 3.77e-01 | 100.0% | 42.6% |
| 8fbnB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 50.0 | 4.74e-01 | 95.1% | 95.5% |
| 3zn3A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 45.0 | 4.16e-01 | 94.1% | 63.0% |
| 3juiA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.57 | 44.0 | 4.53e-01 | 80.5% | 98.9% |
| 5cl3A00 | 1.25.10.90 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › | 0.56 | 50.0 | 4.70e-01 | 100.0% | 90.9% |
| 2xevB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 37.0 | 4.32e-01 | 95.1% | 99.2% |
| 3ro3A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 41.0 | 4.41e-01 | 98.4% | 94.3% |
| 4i1aA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 45.0 | 4.02e-01 | 92.4% | 77.7% |
| 7zcvA02 | 1.25.40.400 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 45.0 | 4.39e-01 | 93.5% | 84.3% |
| 5tqbB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 46.0 | 3.84e-01 | 97.3% | 59.6% |
| 8g52B01 | 1.25.40.920 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TRAP transporter T-component | 0.52 | 44.0 | 3.89e-01 | 91.4% | 79.4% |
| 4i9cA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 43.0 | 4.08e-01 | 90.8% | 85.1% |
| 4jhrB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 45.0 | 3.93e-01 | 98.4% | 67.5% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3299589 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.61 | 54.0 | 3.79e-01 | 100.0% | 30.1% |
| 3682600 | 109.4.1.359 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exo70_C | 0.59 | 42.0 | 4.00e-01 | 71.9% | 93.5% |
| 3174944 | 109.4.1.465 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SPO22 | 0.56 | 48.0 | 4.55e-01 | 93.0% | 76.4% |
| 3245848 | 109.4.1.3118 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, TPR_8, TPR_16 | 0.55 | 50.0 | 3.38e-01 | 100.0% | 27.6% |
| 3798093 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 41.0 | 4.17e-01 | 100.0% | 77.8% |
| 3416923 | 109.26.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains | 0.54 | 50.0 | 3.67e-01 | 100.0% | 87.6% |
| 3304135 | 109.4.1.192 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 | 0.54 | 46.0 | 3.51e-01 | 100.0% | 38.4% |
| 3636208 | 109.4.1.210 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 | 0.53 | 44.0 | 3.43e-01 | 100.0% | 38.9% |
| 3837866 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.52 | 38.0 | 2.65e-01 | 74.6% | 26.5% |
| 4968938 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 44.0 | 3.52e-01 | 95.7% | 46.2% |
| 3605579 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 44.0 | 3.90e-01 | 96.8% | 73.8% |
| None | — | 0.50 | 43.0 | 4.34e-01 | 94.6% | 97.8% |