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hypothetical_protein_pv_195

Euk-Vir

Pithovirus_sibericum

hypothetical_protein_pv_195__YP_009001097__Pithovirus_sibericum__1450746

Identity

Accession:
YP_009001097 ↗
Protein ID:
hypothetical_protein_pv_195
Kingdom:
euk

Quality

55.5 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Pithoviridae› Alphapithovirus› Pithovirus_sibericum

TaxID: 1450746

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 135-256
PDB
Domain cluster: rep: hypothetical_protein_pv_60__YP_009000962__Pithovirus_sibericum__1450746__D4-123
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vw4T01 6.10.330.20 Special › Helix non-globular › Monooxygenase › 0.59 41.0 4.24e-01 91.0% 75.9%
2crbA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.59 35.0 3.84e-01 82.8% 72.2%
1n4kA02 1.25.10.30 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › IP3 receptor type 1 binding core, RIH domain 0.59 52.0 4.89e-01 100.0% 80.4%
2vsoF01 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 43.0 3.49e-01 96.7% 40.7%
2wdqA03 1.20.58.100 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain 0.58 38.0 3.87e-01 85.2% 68.4%
3gb8A01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.57 48.0 3.08e-01 100.0% 18.5%
1qlbA03 1.20.58.100 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain 0.56 36.0 3.69e-01 86.1% 66.1%
4d8mA01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.55 46.0 3.85e-01 91.0% 55.1%
5haxA01 1.20.58.1780 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 47.0 3.76e-01 92.6% 69.1%
5wvoC02 1.10.10.2230 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.54 36.0 4.18e-01 92.6% 95.5%
2hujA00 1.20.120.440 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like 0.53 37.0 3.69e-01 84.4% 69.6%
1uurA01 1.20.58.240 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 0.52 40.0 4.21e-01 83.6% 90.9%
3ipiA00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.52 39.0 3.08e-01 81.1% 81.7%
1i6zA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.51 39.0 3.80e-01 85.2% 71.9%
2w00A05 1.20.58.2040 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 38.0 4.15e-01 96.7% 96.0%
4egwA02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.51 40.0 4.05e-01 83.6% 85.7%
3fseB02 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.50 40.0 3.86e-01 86.1% 91.0%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3326942 109.4.1.171 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › U3snoRNP10 0.63 47.0 3.82e-01 100.0% 42.2%
3801203 109.4.1.2247 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2, TPR_6, TPR_8, TPR_19 0.60 40.0 2.53e-01 90.2% 12.1%
3582202 109.4.1.1162 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm_4 0.60 46.0 3.21e-01 100.0% 24.8%
3221766 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.58 41.0 4.40e-01 86.1% 84.8%
3576107 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.57 40.0 4.05e-01 91.0% 72.5%
3792010 604.1.1.105 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_Anc-1_2 0.55 38.0 4.04e-01 84.4% 82.9%
3738887 109.4.1.509 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RRP12_HEAT 0.54 45.0 2.71e-01 100.0% 12.4%
3246539 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 49.0 3.28e-01 100.0% 65.8%
3915982 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.54 40.0 4.04e-01 83.6% 76.8%
3823764 3684.1.1.2 ↗ alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › BPS1 0.54 44.0 3.58e-01 90.2% 99.6%
3715315 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.53 45.0 3.51e-01 91.0% 62.3%
3715444 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 48.0 3.74e-01 100.0% 46.2%
3208120 633.23.1.22 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL 0.53 39.0 3.63e-01 86.1% 60.6%
4331100 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.53 35.0 3.83e-01 83.6% 86.3%
3721097 109.4.1.348 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF3517 0.53 47.0 3.65e-01 100.0% 58.1%
3499931 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.52 43.0 4.17e-01 91.0% 94.3%
55139 604.3.1.1 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG 0.51 39.0 3.94e-01 85.2% 79.5%
3397045 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.51 43.0 4.12e-01 92.6% 78.6%
3687532 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 42.0 3.16e-01 100.0% 35.2%
3709861 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 45.0 3.75e-01 100.0% 63.7%
D2 high residues 321-400
PDB
D3 medium residues 84-134
PDB