hypothetical_protein_pv_201

Euk-Vir

Pithovirus_sibericum

hypothetical_protein_pv_201__YP_009001103__Pithovirus_sibericum__1450746

Identity

82.1 mean pLDDT

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Pithoviridae› Alphapithovirus› Pithovirus_sibericum

TaxID: 1450746

View cluster (39 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 189-240

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3wd6A02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.69	60.0	4.66e-01	100.0%	92.4%
6orcB00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.64	49.0	3.69e-01	84.6%	41.8%
2r7rA03	1.10.10.1990	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Viral RNA-directed RNA polymerase, 4-helical domain	0.60	42.0	3.86e-01	76.9%	67.1%
3ulqB00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.60	41.0	4.02e-01	73.1%	87.9%
2xf5B00	1.10.10.1530	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.55	39.0	3.97e-01	78.8%	94.0%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3251577	207.1.1.0 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats	0.63	51.0	3.27e-01	98.1%	30.0%
3984815	101.1.1.13 ↗	alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1	0.58	43.0	4.24e-01	78.8%	92.7%
5011219	101.1.2.92 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_11	0.58	39.0	4.02e-01	71.2%	100.0%
4961224	101.1.2.78 ↗	alpha arrays › HTH › HTH › winged helix domain › AlkZ-like	0.56	43.0	3.90e-01	82.7%	98.6%
3337686	5086.1.1.64 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › Sin3_corepress	0.53	39.0	3.08e-01	82.7%	55.0%

D2 medium residues 241-354

PDB

Domain cluster: rep: hypothetical_protein_pv_203__YP_009001105__Pithovirus_sibericum__1450746__D278-371

D3 medium residues 355-472

PDB

Domain cluster: rep: hypothetical_protein_pv_199__YP_009001101__Pithovirus_sibericum__1450746__D366-451