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hypothetical_protein_pv_222
Euk-VirPithovirus_sibericum
hypothetical_protein_pv_222__YP_009001124__Pithovirus_sibericum__1450746
Identity
- Accession:
- YP_009001124 ↗
- Protein ID:
- hypothetical_protein_pv_222
- Kingdom:
- euk
Quality
70.3
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Pithoviridae›
Alphapithovirus›
Pithovirus_sibericum
TaxID: 1450746
Cluster
View cluster (39 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-59
D2
medium
residues 60-113
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2esbA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.54 | 41.0 | 3.14e-01 | 92.6% | 94.4% |
| 3ir4A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 33.0 | 3.00e-01 | 85.2% | 42.3% |
| 5z2mB00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.52 | 35.0 | 2.71e-01 | 70.4% | 51.8% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5040870 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.57 | 44.0 | 3.07e-01 | 94.4% | 59.1% |
| 3734461 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 43.0 | 3.09e-01 | 98.1% | 85.1% |
| 5083232 | 7531.1.1.1 ↗ | a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase | 0.51 | 40.0 | 2.63e-01 | 100.0% | 94.7% |
| 4222859 | 2006.1.4.10 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_4 | 0.51 | 41.0 | 3.12e-01 | 96.3% | 40.0% |
D3
medium
residues 114-226
D4
medium
residues 227-299
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7zcvA02 | 1.25.40.400 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.71 | 62.0 | 4.49e-01 | 100.0% | 70.5% |
| 6t0bf00 | 1.25.40.40 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Cytochrome c oxidase, subunit Va/VI | 0.70 | 56.0 | 5.06e-01 | 89.0% | 87.3% |
| 5xdcB01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.69 | 52.0 | 4.55e-01 | 80.8% | 77.5% |
| 1wy6A00 | 1.25.40.350 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.68 | 57.0 | 4.57e-01 | 97.3% | 62.9% |
| 8cdaC01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.67 | 54.0 | 4.61e-01 | 87.7% | 95.7% |
| 3mkrA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.66 | 57.0 | 3.86e-01 | 100.0% | 40.5% |
| 3qkyA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.66 | 55.0 | 3.86e-01 | 95.9% | 43.0% |
| 5nnpE01 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.66 | 54.0 | 3.34e-01 | 94.5% | 20.4% |
| 2vq2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.65 | 56.0 | 4.07e-01 | 100.0% | 56.4% |
| 2gmyD00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.65 | 46.0 | 3.71e-01 | 95.9% | 37.9% |
| 4kvmA01 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.65 | 56.0 | 3.41e-01 | 100.0% | 21.5% |
| 1qqeA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.65 | 53.0 | 3.64e-01 | 94.5% | 43.1% |
| 6vvoE02 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.64 | 44.0 | 3.99e-01 | 71.2% | 90.9% |
| 2q7fA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.64 | 55.0 | 4.16e-01 | 100.0% | 41.2% |
| 4rg9B01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.64 | 55.0 | 4.30e-01 | 100.0% | 69.5% |
| 2pqrA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.64 | 53.0 | 4.91e-01 | 93.2% | 87.1% |
| 4ui9J00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.64 | 54.0 | 3.33e-01 | 100.0% | 24.2% |
| 3mkqB00 | 1.25.40.470 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 52.0 | 4.05e-01 | 95.9% | 93.8% |
| 3lszA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.63 | 48.0 | 4.08e-01 | 83.6% | 78.4% |
| 3cvpA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.63 | 53.0 | 3.70e-01 | 100.0% | 29.0% |
| 4epzA00 | 1.25.40.810 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ | 0.63 | 54.0 | 4.33e-01 | 100.0% | 72.1% |
| 3mkqA03 | 1.25.40.470 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 52.0 | 3.80e-01 | 94.5% | 36.3% |
| 2b1eA04 | 1.20.1280.170 | Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 | 0.62 | 47.0 | 3.98e-01 | 82.2% | 83.5% |
| 6ll8A01 | 3.90.1640.10 | Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › inorganic pyrophosphatase (n-terminal core) | 0.62 | 49.0 | 3.73e-01 | 87.7% | 93.0% |
| 1f2eA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.62 | 47.0 | 4.24e-01 | 83.6% | 84.0% |
| 3gz1A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 52.0 | 4.30e-01 | 100.0% | 58.3% |
| 1vkeB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.61 | 48.0 | 4.43e-01 | 90.4% | 86.1% |
| 2dbaA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 52.0 | 4.52e-01 | 100.0% | 79.7% |
| 2gw1A02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 50.0 | 3.30e-01 | 100.0% | 35.6% |
| 1dk5A04 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.60 | 43.0 | 4.41e-01 | 76.7% | 100.0% |
| 2pusA04 | 6.10.140.300 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 40.0 | 3.61e-01 | 72.6% | 59.3% |
| 1zbpA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 45.0 | 4.40e-01 | 90.4% | 89.4% |
| 2vkpB00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.55 | 43.0 | 3.83e-01 | 86.3% | 100.0% |
| 3zssA02 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.54 | 39.0 | 3.89e-01 | 76.7% | 73.4% |
| 2ppiA01 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.53 | 43.0 | 3.81e-01 | 90.4% | 91.7% |
| 2vf7B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 44.0 | 2.98e-01 | 100.0% | 64.6% |
| 1orsC00 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.52 | 40.0 | 3.36e-01 | 86.3% | 76.5% |
ECOD (74)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4011096 | 109.3.1.166 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3 | 0.78 | 63.0 | 4.10e-01 | 87.7% | 29.4% |
| 5077588 | 109.4.1.5 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 | 0.75 | 65.0 | 4.82e-01 | 97.3% | 74.7% |
| 3348685 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.74 | 60.0 | 4.49e-01 | 90.4% | 43.8% |
| 3657285 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.73 | 63.0 | 4.37e-01 | 95.9% | 42.1% |
| 3896986 | 109.3.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › TRP_2 | 0.73 | 63.0 | 4.18e-01 | 97.3% | 44.4% |
| 3816720 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.71 | 56.0 | 4.51e-01 | 86.3% | 51.7% |
| 3316270 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.71 | 54.0 | 4.18e-01 | 82.2% | 45.5% |
| 3659725 | 109.4.1.1383 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, Eplus_motif, E_motif | 0.71 | 57.0 | 3.36e-01 | 89.0% | 17.0% |
| 3337844 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.71 | 53.0 | 3.79e-01 | 82.2% | 32.6% |
| 3707711 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.70 | 61.0 | 3.75e-01 | 100.0% | 32.8% |
| 3261159 | 604.17.1.0 ↗ | alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like | 0.70 | 57.0 | 4.55e-01 | 91.8% | 65.8% |
| 3302156 | 109.4.1.1305 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long, TPR_24 | 0.70 | 59.0 | 3.64e-01 | 95.9% | 25.4% |
| 3676670 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.70 | 56.0 | 3.58e-01 | 91.8% | 26.2% |
| 3679151 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.70 | 56.0 | 4.55e-01 | 89.0% | 65.7% |
| 3468036 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.70 | 61.0 | 5.02e-01 | 97.3% | 70.0% |
| 3675493 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 58.0 | 4.69e-01 | 94.5% | 75.9% |
| 3581520 | 109.4.1.2723 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_16, ARM_TT21_C, ARM_TT21_5th | 0.68 | 59.0 | 3.84e-01 | 100.0% | 38.9% |
| 3381270 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.68 | 59.0 | 3.60e-01 | 100.0% | 25.0% |
| 5064460 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.68 | 59.0 | 4.23e-01 | 100.0% | 60.4% |
| 3459632 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.68 | 59.0 | 3.91e-01 | 100.0% | 37.5% |
| 3821986 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.68 | 56.0 | 3.79e-01 | 91.8% | 36.7% |
| 3826428 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.67 | 59.0 | 4.85e-01 | 100.0% | 71.9% |
| 5064766 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.67 | 60.0 | 3.69e-01 | 100.0% | 24.9% |
| 3457282 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.67 | 55.0 | 3.83e-01 | 95.9% | 32.5% |
| 3371871 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 57.0 | 4.32e-01 | 97.3% | 52.4% |
| 3727990 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.67 | 54.0 | 3.80e-01 | 90.4% | 36.4% |
| 3315528 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.67 | 57.0 | 4.34e-01 | 100.0% | 63.7% |
| 3824590 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.66 | 53.0 | 4.18e-01 | 90.4% | 60.0% |
| 3348499 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.66 | 51.0 | 4.72e-01 | 86.3% | 94.0% |
| 3420321 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.66 | 57.0 | 3.57e-01 | 100.0% | 29.9% |
| 3824591 | 109.4.1.1476 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, DYW_deaminase, E_motif | 0.66 | 57.0 | 3.44e-01 | 100.0% | 22.6% |
| 3679964 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.66 | 58.0 | 4.71e-01 | 100.0% | 67.9% |
| 3695318 | 109.4.1.173 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NatA_aux_su | 0.66 | 56.0 | 3.32e-01 | 100.0% | 39.2% |
| 3668229 | 109.4.1.1272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif | 0.66 | 57.0 | 3.69e-01 | 100.0% | 35.0% |
| 3310170 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.66 | 52.0 | 3.36e-01 | 90.4% | 27.4% |
| 3361838 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.65 | 57.0 | 4.44e-01 | 100.0% | 75.8% |
| 3651540 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.65 | 56.0 | 4.19e-01 | 100.0% | 63.0% |
| 3448938 | 109.4.1.1262 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long | 0.65 | 56.0 | 4.39e-01 | 100.0% | 55.9% |
| 3655490 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.65 | 57.0 | 4.10e-01 | 100.0% | 74.7% |
| 3329315 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 57.0 | 3.99e-01 | 100.0% | 53.9% |
| 3679167 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.65 | 56.0 | 3.80e-01 | 100.0% | 43.1% |
| 3827405 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.65 | 55.0 | 3.58e-01 | 100.0% | 33.7% |
| 3325706 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.65 | 52.0 | 4.13e-01 | 90.4% | 60.0% |
| 3615066 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 56.0 | 3.86e-01 | 100.0% | 53.5% |
| 3801993 | 109.4.1.1335 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, E_motif | 0.65 | 56.0 | 3.68e-01 | 100.0% | 27.4% |
| 3301042 | 109.4.1.1272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif | 0.65 | 56.0 | 3.69e-01 | 100.0% | 38.2% |
| 3277865 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 53.0 | 4.48e-01 | 95.9% | 76.3% |
| 3449066 | 109.4.1.1290 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_19 | 0.64 | 53.0 | 4.38e-01 | 94.5% | 64.3% |
| 3928678 | 109.4.1.669 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8,TTC7_N | 0.64 | 55.0 | 3.25e-01 | 100.0% | 22.0% |
| 3675450 | 109.4.1.621 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_3 | 0.64 | 56.0 | 4.30e-01 | 100.0% | 64.6% |
| 3648599 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.64 | 55.0 | 3.60e-01 | 100.0% | 35.2% |
| 3346683 | 109.4.1.1293 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1 | 0.64 | 54.0 | 3.96e-01 | 100.0% | 53.8% |
| 2326858 | 109.4.1.200 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_14 | 0.64 | 54.0 | 4.74e-01 | 98.6% | 83.9% |
| 3366458 | 109.4.1.3005 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3, DYW_deaminase | 0.64 | 55.0 | 3.47e-01 | 100.0% | 29.4% |
| 3305410 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.64 | 55.0 | 3.93e-01 | 100.0% | 51.9% |
| 3320289 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.64 | 54.0 | 4.73e-01 | 100.0% | 77.5% |
| 3331058 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.64 | 54.0 | 3.49e-01 | 100.0% | 32.8% |
| 3403612 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.64 | 45.0 | 3.25e-01 | 74.0% | 41.5% |
| 3305975 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.64 | 54.0 | 4.54e-01 | 100.0% | 70.4% |
| 3379554 | 109.4.1.1767 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, E_motif | 0.63 | 52.0 | 3.57e-01 | 94.5% | 34.0% |
| 3309920 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.63 | 50.0 | 4.14e-01 | 89.0% | 53.6% |
| 4286990 | 109.4.1.1995 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_4, TPR_16, TPR_19 | 0.63 | 55.0 | 3.62e-01 | 100.0% | 27.6% |
| 3626027 | 109.4.1.1312 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30475 | 0.63 | 54.0 | 3.82e-01 | 100.0% | 43.6% |
| 3937701 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 54.0 | 4.54e-01 | 100.0% | 78.5% |
| 3430064 | 109.4.1.1274 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long | 0.63 | 53.0 | 4.19e-01 | 100.0% | 75.3% |
| 3661552 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.63 | 54.0 | 3.92e-01 | 97.3% | 53.7% |
| 2773532 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 53.0 | 4.05e-01 | 100.0% | 51.6% |
| 3347276 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.62 | 51.0 | 4.33e-01 | 94.5% | 79.2% |
| 3676558 | 109.4.1.1261 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long | 0.62 | 53.0 | 3.97e-01 | 100.0% | 64.5% |
| 4950305 | 3932.1.1.0 ↗ | alpha bundles › CRISPR/Cas system-associated protein Csm6 6H domain › CRISPR/Cas system-associated protein Csm6 6H domain › CRISPR/Cas system-associated protein Csm6 6H domain | 0.62 | 47.0 | 4.84e-01 | 82.2% | 91.4% |
| 3439874 | 109.4.1.1258 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 | 0.61 | 51.0 | 3.25e-01 | 100.0% | 26.7% |
| 3392720 | 109.4.1.278 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Bdbt-like_TPR | 0.61 | 49.0 | 3.95e-01 | 93.2% | 79.4% |
| 3818643 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.61 | 50.0 | 4.32e-01 | 97.3% | 89.6% |
| 4956253 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.51 | 42.0 | 3.74e-01 | 90.4% | 75.2% |
D5
medium
residues 300-403
D6
medium
residues 404-502
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5hayA02 | 1.25.40.440 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Nucleoporin, helical domain, central subdomain | 0.64 | 45.0 | 5.00e-01 | 91.9% | 92.4% |
| 2r5sA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 46.0 | 4.77e-01 | 96.0% | 97.7% |
| 1bucA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.55 | 38.0 | 3.56e-01 | 70.7% | 79.7% |
| 8gr7A01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.55 | 46.0 | 3.33e-01 | 97.0% | 51.7% |
| 2uubT00 | 1.20.58.110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 | 0.54 | 37.0 | 3.70e-01 | 91.9% | 69.7% |
| 3tjmA02 | 1.10.1470.20 | Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 | 0.52 | 40.0 | 4.16e-01 | 90.9% | 88.9% |
| 3h20A04 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.51 | 38.0 | 4.00e-01 | 80.8% | 89.9% |
| 1oe8A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 42.0 | 3.97e-01 | 93.9% | 83.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3598377 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 51.0 | 3.71e-01 | 87.9% | 61.0% |
| 3592585 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 50.0 | 4.57e-01 | 100.0% | 65.2% |
| 3238198 | 109.4.1.917 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_TT21_N | 0.59 | 43.0 | 3.19e-01 | 100.0% | 27.9% |
| 3521675 | 109.4.1.102 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › WAPL | 0.57 | 52.0 | 3.23e-01 | 100.0% | 31.5% |
| 3928069 | 109.4.1.917 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_TT21_N | 0.56 | 42.0 | 3.83e-01 | 100.0% | 59.3% |
| 3888873 | 109.4.1.102 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › WAPL | 0.55 | 50.0 | 3.47e-01 | 100.0% | 46.0% |
| 3873621 | 109.4.1.195 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_11 | 0.55 | 41.0 | 3.24e-01 | 97.0% | 34.8% |
| 4012537 | 109.4.1.185 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ANAPC5 | 0.55 | 46.0 | 2.97e-01 | 99.0% | 17.2% |
| 3821959 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 48.0 | 4.30e-01 | 100.0% | 96.4% |
| 3829049 | 174.1.1.90 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › RPW8 | 0.53 | 36.0 | 3.39e-01 | 72.7% | 56.0% |
| 3520448 | 2484.1.1.250 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046 | 0.51 | 40.0 | 3.02e-01 | 83.8% | 51.6% |