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hypothetical_protein_pv_225
Euk-VirPithovirus_sibericum
hypothetical_protein_pv_225__YP_009001127__Pithovirus_sibericum__1450746
Identity
- Accession:
- YP_009001127 ↗
- Protein ID:
- hypothetical_protein_pv_225
- Kingdom:
- euk
Quality
79.4
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Pithoviridae›
Alphapithovirus›
Pithovirus_sibericum
TaxID: 1450746
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-93
Domain cluster:
rep: hypothetical_protein_pv_328__YP_009001230__Pithovirus_sibericum__1450746__D13-91
D2
medium
residues 98-167
Domain cluster:
rep: hypothetical_protein_pv_216__YP_009001118__Pithovirus_sibericum__1450746__D120-200
D3
medium
residues 238-360
Domain cluster:
rep: hypothetical_protein_pv_216__YP_009001118__Pithovirus_sibericum__1450746__D298-388
D4
medium
residues 361-467
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vwaA03 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.64 | 57.0 | 4.20e-01 | 100.0% | 47.0% |
| 5cwkA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.63 | 56.0 | 4.90e-01 | 100.0% | 83.3% |
| 3mkqB00 | 1.25.40.470 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.59 | 45.0 | 3.85e-01 | 100.0% | 49.2% |
| 4gyoA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 47.0 | 3.83e-01 | 88.8% | 63.6% |
| 3a8pA02 | 6.10.140.680 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 40.0 | 3.92e-01 | 72.0% | 89.5% |
| 3hraA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.56 | 49.0 | 4.11e-01 | 100.0% | 72.9% |
| 4dyqA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.50 | 35.0 | 3.55e-01 | 72.0% | 95.1% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3756925 | 109.4.1.11 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI3Ka | 0.68 | 59.0 | 5.50e-01 | 100.0% | 76.3% |
| 3429552 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.60 | 50.0 | 4.59e-01 | 96.3% | 69.3% |
| 3926487 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.59 | 48.0 | 4.91e-01 | 98.1% | 91.4% |
| 3262747 | 109.27.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › BACK | 0.58 | 51.0 | 4.81e-01 | 100.0% | 87.4% |
| 3279122 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.57 | 47.0 | 4.66e-01 | 86.9% | 94.5% |
| 3490738 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 49.0 | 4.71e-01 | 96.3% | 84.0% |