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hypothetical_protein_pv_286

Euk-Vir

Pithovirus_sibericum

hypothetical_protein_pv_286__YP_009001188__Pithovirus_sibericum__1450746

Identity

Accession:
YP_009001188 ↗
Protein ID:
hypothetical_protein_pv_286
Kingdom:
euk

Quality

75.7 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Pithoviridae› Alphapithovirus› Pithovirus_sibericum

TaxID: 1450746

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-80
PDB
Domain cluster: rep: hypothetical_protein_pv_18__YP_009000920__Pithovirus_sibericum__1450746__D5-83
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6m90A01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.70 61.0 5.59e-01 100.0% 87.9%
3l2oB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.69 56.0 5.30e-01 89.2% 92.0%
3v7dD01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.68 59.0 5.43e-01 100.0% 89.0%
2ovrB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.67 50.0 4.77e-01 89.2% 67.8%
1hqvA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.65 53.0 3.98e-01 87.8% 85.4%
2p1aB01 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.65 53.0 4.22e-01 87.8% 58.9%
2q0oC00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.63 39.0 3.76e-01 89.2% 54.7%
1jeqA05 1.10.720.30 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain 0.63 42.0 4.85e-01 82.4% 100.0%
2e5zA01 1.10.10.790 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Surp module 0.62 45.0 4.99e-01 91.9% 96.6%
2yqyA00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.62 48.0 4.06e-01 85.1% 62.7%
2etnB01 1.10.287.180 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain 0.60 38.0 3.82e-01 90.5% 63.2%
1iq3A00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.59 44.0 3.95e-01 82.4% 62.7%
1b4cA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.58 44.0 4.20e-01 85.1% 89.1%
3bhqA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.57 45.0 3.38e-01 87.8% 67.3%
1fs2A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.57 47.0 3.21e-01 90.5% 36.3%
7smtA02 1.20.58.390 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain 0.56 39.0 2.98e-01 73.0% 44.3%
5dicA00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.54 40.0 3.58e-01 83.8% 91.3%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.53 34.0 3.23e-01 87.8% 54.4%
5c8aA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.52 38.0 3.76e-01 75.7% 94.9%
4l7mA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.52 42.0 2.92e-01 90.5% 49.0%
2x6hA01 1.25.40.70 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK) 0.52 44.0 3.40e-01 100.0% 40.9%
2eyqA07 3.90.1150.50 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain 0.51 41.0 3.48e-01 97.3% 82.3%
ECOD (93)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3802856 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.88 54.0 6.23e-01 91.9% 83.6%
3420610 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.87 52.0 6.02e-01 87.8% 81.8%
3826054 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.86 53.0 6.05e-01 87.8% 83.6%
3451260 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 54.0 6.01e-01 97.3% 81.7%
3432917 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.83 50.0 6.20e-01 91.9% 100.0%
3250247 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 57.0 6.28e-01 89.2% 90.0%
3344585 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.81 56.0 5.98e-01 100.0% 81.5%
3821011 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.81 54.0 6.25e-01 97.3% 92.7%
3294473 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.81 50.0 6.01e-01 87.8% 94.0%
3837390 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.80 53.0 5.52e-01 75.7% 72.9%
3879309 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.78 60.0 6.23e-01 81.1% 85.7%
3595717 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.78 63.0 6.64e-01 93.2% 100.0%
3833527 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 53.0 5.74e-01 85.1% 88.3%
3829820 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.76 51.0 5.64e-01 97.3% 86.7%
3199694 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.75 69.0 5.49e-01 100.0% 65.0%
3301883 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.74 62.0 6.02e-01 89.2% 93.8%
3276040 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.74 55.0 5.69e-01 89.2% 84.3%
3473623 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.74 66.0 6.31e-01 97.3% 87.1%
3917759 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.73 61.0 5.50e-01 90.5% 85.0%
3644704 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.73 60.0 5.74e-01 89.2% 89.4%
3186415 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.72 65.0 6.22e-01 98.6% 94.1%
3358453 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.72 57.0 5.85e-01 89.2% 90.0%
3743076 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.72 60.0 5.52e-01 90.5% 95.8%
3781279 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.71 63.0 6.18e-01 98.6% 95.0%
3259869 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.71 61.0 5.85e-01 94.6% 92.9%
3380116 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.71 53.0 5.49e-01 79.7% 88.2%
3731690 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.70 55.0 5.41e-01 85.1% 91.3%
3456091 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.70 49.0 5.56e-01 82.4% 98.2%
3189083 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.70 55.0 5.48e-01 85.1% 85.3%
3646821 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.70 56.0 5.67e-01 89.2% 93.3%
3272348 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.69 61.0 5.49e-01 100.0% 91.4%
3204462 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.69 57.0 4.81e-01 90.5% 84.0%
3176338 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.69 61.0 6.00e-01 98.6% 91.3%
3490408 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.69 56.0 4.78e-01 89.2% 92.5%
3886321 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.69 59.0 5.76e-01 94.6% 95.0%
3623404 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.69 58.0 5.06e-01 94.6% 80.0%
3854965 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.68 55.0 5.19e-01 87.8% 93.3%
3547224 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.68 50.0 4.77e-01 77.0% 70.6%
3194725 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.68 59.0 5.62e-01 94.6% 94.1%
3208443 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.68 58.0 5.15e-01 93.2% 83.8%
3736988 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.68 50.0 4.42e-01 86.5% 52.7%
3806475 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.68 55.0 5.49e-01 89.2% 86.7%
3331958 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.68 57.0 5.31e-01 94.6% 84.2%
3257315 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.68 57.0 5.89e-01 98.6% 100.0%
3486259 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.68 53.0 4.92e-01 85.1% 100.0%
3429995 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.67 51.0 5.17e-01 81.1% 82.2%
3335288 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.67 53.0 4.60e-01 85.1% 54.8%
3740971 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.67 57.0 5.49e-01 94.6% 87.1%
3909942 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.67 58.0 5.14e-01 100.0% 65.5%
3698023 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.67 58.0 5.11e-01 100.0% 83.5%
3344543 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.67 54.0 5.21e-01 89.2% 89.4%
2899589 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.67 56.0 5.68e-01 100.0% 94.6%
3613821 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.67 53.0 5.47e-01 89.2% 91.4%
3902311 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.66 52.0 5.00e-01 85.1% 92.9%
3730967 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.66 54.0 4.83e-01 89.2% 73.3%
4023099 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.66 56.0 4.87e-01 94.6% 83.5%
3726840 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.66 54.0 5.40e-01 89.2% 92.0%
3742900 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.66 55.0 4.60e-01 94.6% 87.4%
2862888 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.66 53.0 4.89e-01 89.2% 74.2%
3668652 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.66 52.0 5.18e-01 85.1% 92.0%
3337545 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.66 51.0 5.38e-01 85.1% 96.9%
3323668 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.66 54.0 5.43e-01 90.5% 94.7%
3194125 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.66 56.0 5.51e-01 94.6% 92.5%
4011985 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.65 58.0 5.46e-01 98.6% 95.6%
3363836 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.65 53.0 5.07e-01 89.2% 90.6%
3188576 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.65 51.0 4.93e-01 85.1% 88.2%
3257162 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.65 52.0 4.67e-01 90.5% 61.9%
3355293 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.65 54.0 4.94e-01 93.2% 96.0%
3355899 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.65 51.0 4.91e-01 85.1% 94.1%
3711287 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.65 55.0 5.00e-01 100.0% 68.3%
3810074 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.65 55.0 5.40e-01 94.6% 87.3%
3575456 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.65 54.0 5.11e-01 94.6% 93.3%
3617852 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.65 51.0 5.27e-01 86.5% 94.3%
3425357 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.65 51.0 5.01e-01 85.1% 91.0%
3770072 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.64 57.0 5.40e-01 100.0% 82.2%
3300009 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.64 53.0 5.18e-01 89.2% 88.7%
3821430 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.64 52.0 5.14e-01 89.2% 86.3%
3485475 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.64 56.0 5.37e-01 100.0% 87.1%
3312720 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.64 51.0 5.15e-01 86.5% 93.3%
3300713 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.64 50.0 5.00e-01 85.1% 93.3%
3477761 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.64 53.0 5.15e-01 94.6% 87.1%
3348915 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.63 56.0 4.93e-01 100.0% 82.7%
5003499 109.3.1.484 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF2238 0.63 56.0 3.96e-01 100.0% 68.3%
3491937 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.63 54.0 5.07e-01 94.6% 94.4%
3762363 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.63 54.0 3.29e-01 100.0% 89.4%
4022899 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.63 52.0 4.73e-01 90.5% 78.0%
3643181 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.63 51.0 5.12e-01 89.2% 89.3%
3728200 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.63 49.0 5.01e-01 87.8% 91.4%
3257387 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.62 52.0 5.06e-01 94.6% 85.9%
3675534 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.62 50.0 4.93e-01 89.2% 86.3%
3299128 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.62 54.0 4.95e-01 100.0% 74.0%
4019682 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.62 53.0 4.96e-01 100.0% 92.6%
3697864 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.61 48.0 4.38e-01 89.2% 95.2%
D2 high residues 87-251
PDB