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hypothetical_protein_pv_318

Euk-Vir

Pithovirus_sibericum

hypothetical_protein_pv_318__YP_009001220__Pithovirus_sibericum__1450746

Identity

Accession:
YP_009001220 ↗
Protein ID:
hypothetical_protein_pv_318
Kingdom:
euk

Quality

75.2 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Pithoviridae› Alphapithovirus› Pithovirus_sibericum

TaxID: 1450746

Cluster

View cluster (39 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-81
PDB
Domain cluster: rep: hypothetical_protein_pv_328__YP_009001230__Pithovirus_sibericum__1450746__D13-91
D2 medium residues 114-204
PDB
D3 medium residues 344-443
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4bszB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.76 55.0 4.79e-01 76.0% 64.7%
2lhrA00 1.20.58.1270 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 43.0 4.77e-01 86.0% 76.9%
2yinA01 1.25.40.410 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › DOCK DHR2 domain, lobe A 0.69 51.0 4.70e-01 77.0% 79.7%
1b89A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.65 53.0 3.70e-01 88.0% 32.6%
5aioA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.63 48.0 4.15e-01 88.0% 51.6%
3gz1A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.63 47.0 4.15e-01 79.0% 57.6%
1hh8A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 53.0 4.31e-01 94.0% 87.5%
1zbpA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 47.0 5.06e-01 82.0% 96.5%
3fp3A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 47.0 4.28e-01 83.0% 79.3%
6cxtB01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.60 43.0 4.21e-01 76.0% 94.6%
3ceqA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 50.0 3.74e-01 91.0% 42.0%
2yvyA01 1.25.60.10 Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like 0.60 45.0 4.18e-01 79.0% 67.2%
4gpkF02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 51.0 3.90e-01 97.0% 65.4%
4rg6A03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 46.0 4.21e-01 87.0% 88.7%
5jj6B01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.56 44.0 4.52e-01 88.0% 99.0%
2ynqB00 1.25.40.680 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain 0.55 41.0 3.64e-01 80.0% 76.2%
1khdA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.55 39.0 3.92e-01 75.0% 97.0%
2r5sA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 41.0 4.41e-01 85.0% 100.0%
1s35A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 43.0 4.23e-01 88.0% 91.8%
2vixA03 1.20.1280.240 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.50 41.0 3.96e-01 91.0% 99.1%
3h20A04 1.10.1240.50 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.50 36.0 3.76e-01 74.0% 83.1%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3848558 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.72 59.0 5.63e-01 87.0% 100.0%
None — 0.71 58.0 5.75e-01 87.0% 83.8%
3816080 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 55.0 4.82e-01 88.0% 73.8%
3774482 109.4.1.192 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.64 55.0 3.59e-01 92.0% 42.4%
3426712 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 52.0 4.12e-01 88.0% 44.3%
3862743 109.4.1.1653 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Iml2-TPR_39, TPR_8 0.64 56.0 3.60e-01 95.0% 54.3%
3565168 109.4.1.1183 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TTC3 0.64 56.0 3.30e-01 94.0% 53.2%
3779853 109.4.1.1605 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_14 0.64 53.0 4.09e-01 90.0% 70.5%
3693764 109.4.1.1315 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_7, TPR_8, TPR_10, TPR_12 0.63 50.0 4.74e-01 85.0% 85.8%
4879920 109.4.1.669 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8,TTC7_N 0.63 50.0 4.24e-01 85.0% 53.7%
3620223 109.4.1.110 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mad3_BUB1_I 0.61 52.0 4.03e-01 94.0% 42.7%
3682841 109.4.1.339 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TRAPPC-Trs85 0.60 50.0 3.55e-01 90.0% 38.1%
3915211 109.4.1.1286 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_12 0.60 54.0 4.56e-01 99.0% 86.1%
3705441 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 50.0 3.42e-01 95.0% 64.2%
4069535 7015.1.1.1 ↗ alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC 0.60 44.0 3.53e-01 76.0% 88.6%
2875705 109.4.1.1306 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_11 0.60 49.0 5.15e-01 90.0% 97.8%
3853423 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 50.0 4.61e-01 95.0% 91.9%
3382232 109.4.1.198 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.57 51.0 3.83e-01 98.0% 55.5%
4370526 109.4.1.210 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 0.56 43.0 4.37e-01 84.0% 85.0%
1840703 109.4.1.210 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 0.56 45.0 4.61e-01 89.0% 97.9%
3706334 109.4.1.850 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RPN2_N 0.53 43.0 3.88e-01 90.0% 63.4%
3227955 2484.8.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Separase pseudo-protease domain (PPD) › Separase pseudo-protease domain (PPD) › Peptidase_C50 0.52 45.0 3.30e-01 94.0% 71.5%
3275734 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.52 44.0 3.76e-01 95.0% 78.8%
3484314 633.1.1.0 ↗ alpha bundles › Bromodomain-like › Bromodomain › Bromodomain 0.51 44.0 3.92e-01 100.0% 67.9%