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hypothetical_protein_pv_339

Euk-Vir

Pithovirus_sibericum

hypothetical_protein_pv_339__YP_009001241__Pithovirus_sibericum__1450746

Identity

Accession:
YP_009001241 ↗
Protein ID:
hypothetical_protein_pv_339
Kingdom:
euk

Quality

62.6 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Pithoviridae› Alphapithovirus› Pithovirus_sibericum

TaxID: 1450746

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 22-99
PDB
Domain cluster: rep: hypothetical_protein_pv_336__YP_009001238__Pithovirus_sibericum__1450746__D5-72
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3v7dD01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.73 66.0 6.05e-01 100.0% 91.0%
2ovrB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.67 51.0 4.91e-01 96.2% 72.4%
2o71A00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.61 43.0 4.16e-01 79.5% 63.7%
4cc9B00 1.20.5.4730 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.60 41.0 3.92e-01 73.1% 73.5%
1wixA01 1.10.418.10 Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain 0.58 43.0 3.57e-01 82.1% 53.6%
1bo9A00 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.54 38.0 3.92e-01 91.0% 80.8%
5zi7A03 1.10.390.10 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 0.53 44.0 3.68e-01 97.4% 52.9%
4ci1B03 1.20.58.1480 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 37.0 3.93e-01 79.5% 85.5%
1zoyD00 1.20.1300.10 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit 0.53 37.0 3.44e-01 74.4% 82.4%
2ynqB00 1.25.40.680 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain 0.52 44.0 3.68e-01 100.0% 70.2%
4evfA02 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.52 36.0 3.69e-01 87.2% 77.0%
3lxuX06 1.25.40.710 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 38.0 2.73e-01 79.5% 40.0%
4rg9B01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 37.0 3.04e-01 80.8% 74.9%
8sppA01 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.51 37.0 2.49e-01 79.5% 86.9%
4ap2B01 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.51 42.0 3.62e-01 96.2% 91.8%
4wqoD00 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.50 43.0 3.63e-01 100.0% 94.3%
1dj8A00 1.10.890.10 Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › HNS-dependent expression A 0.50 44.0 4.40e-01 97.4% 100.0%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3693211 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.79 73.0 6.58e-01 100.0% 79.6%
3430562 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.77 64.0 6.56e-01 91.0% 100.0%
3244680 145.1.1.2 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › Elongin_A 0.71 57.0 5.69e-01 100.0% 86.3%
3439847 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.70 58.0 5.70e-01 91.0% 95.3%
3244032 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.69 56.0 5.59e-01 100.0% 87.5%
3230197 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.68 52.0 5.53e-01 94.9% 100.0%
3443365 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.68 58.0 5.82e-01 94.9% 97.4%
3636536 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.67 60.0 5.06e-01 100.0% 64.4%
3731690 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.66 57.0 5.69e-01 94.9% 96.2%
3725419 148.1.3.268 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › F-box 0.65 58.0 3.80e-01 100.0% 30.0%
3738975 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.65 41.0 4.58e-01 91.0% 85.0%
4547515 145.1.1.2 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › Elongin_A 0.64 54.0 4.73e-01 98.7% 93.6%
3208252 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.63 54.0 4.98e-01 94.9% 92.0%
3470094 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.63 50.0 4.72e-01 100.0% 71.0%
3562126 145.1.1.2 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › Elongin_A 0.62 53.0 4.89e-01 98.7% 81.0%
3592099 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.61 43.0 4.67e-01 80.8% 90.8%
3343871 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.59 44.0 3.40e-01 80.8% 72.6%
1872977 176.1.1.1 ↗ alpha arrays › Annexin › Annexin › Annexin › Annexin 0.57 39.0 4.07e-01 91.0% 80.0%
3477755 176.1.1.1 ↗ alpha arrays › Annexin › Annexin › Annexin › Annexin 0.54 38.0 3.66e-01 93.6% 62.1%
5023625 5054.1.1.8 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.54 34.0 3.20e-01 97.4% 50.0%
4995885 5060.2.1.0 ↗ alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain 0.51 37.0 3.34e-01 83.3% 52.5%
D2 medium residues 274-370
PDB
D3 medium residues 371-431
PDB