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hypothetical_protein_pv_69

Euk-Vir

Pithovirus_sibericum

hypothetical_protein_pv_69__YP_009000971__Pithovirus_sibericum__1450746

Identity

Accession:: YP_009000971 ↗
Protein ID:: hypothetical_protein_pv_69
Kingdom:: euk

Quality

68.0 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Pithoviridae› Alphapithovirus› Pithovirus_sibericum

TaxID: 1450746

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-123

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2oocB00	1.20.120.160	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain	0.54	34.0	3.59e-01	84.3%	70.5%
5cl3A00	1.25.10.90	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant ›	0.53	45.0	3.62e-01	90.9%	56.7%
2g6zA00	3.90.190.10	Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily	0.52	36.0	3.39e-01	71.1%	100.0%
2e52B01	3.40.91.70	Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Type II restriction endonuclease, HindIII	0.50	44.0	3.66e-01	99.2%	98.2%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3234962	145.1.1.2 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › Elongin_A	0.70	42.0	4.81e-01	71.9%	80.0%
3230197	145.1.1.0 ↗	alpha arrays › F-box domain › F-box domain › F-box domain	0.70	39.0	4.99e-01	82.6%	100.0%
3244032	145.1.1.0 ↗	alpha arrays › F-box domain › F-box domain › F-box domain	0.67	44.0	5.15e-01	96.7%	100.0%
3244680	145.1.1.2 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › Elongin_A	0.67	44.0	5.19e-01	99.2%	100.0%
3446581	145.1.1.3 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like	0.63	43.0	4.97e-01	90.9%	100.0%
3636536	145.1.1.3 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like	0.55	50.0	4.92e-01	98.3%	97.7%
3934745	108.1.1.0 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand	0.55	33.0	3.14e-01	80.2%	49.7%
3725419	148.1.3.268 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › F-box	0.53	47.0	3.43e-01	97.5%	78.2%
3225589	108.1.1.26 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5	0.52	33.0	3.82e-01	79.3%	89.4%
4547515	145.1.1.2 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › Elongin_A	0.52	47.0	4.68e-01	98.3%	100.0%
5012829	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.52	46.0	3.74e-01	100.0%	56.7%
3193848	109.4.1.1276 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FAT, HEAT_ATR	0.50	41.0	3.24e-01	87.6%	64.3%

D2 medium residues 124-181

PDB

D3 medium residues 332-387

PDB

D4 medium residues 388-450

PDB