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iap-2

Euk-Vir

Cryptophlebia_peltastica_nucleopolyhedrovirus

iap-2__YP_010086927__Cryptophlebia_peltastica_nucleopolyhedrovirus__2304025

Identity

Accession:
YP_010086927 ↗
Protein ID:
iap-2
Kingdom:
euk

Quality

76.6 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Cryptophlebia_peltastica_nucleopolyhedrovirus

TaxID: 2304025

Cluster

View cluster (27 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 16-77
PDB
Domain cluster: rep: alkaline_exonuclease__YP_010086987__Cryptophlebia_peltastica_nucleopolyhedrovirus__2304025__D258-315
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2poiA00 1.10.1170.10 Mainly Alpha › Orthogonal Bundle › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A 0.77 69.0 6.38e-01 100.0% 87.2%
1i3oF00 1.10.1170.10 Mainly Alpha › Orthogonal Bundle › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A 0.73 64.0 5.53e-01 100.0% 63.4%
4hs5A00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.59 44.0 3.81e-01 83.9% 88.6%
3m6aA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 43.0 3.32e-01 85.5% 98.0%
4hvlA00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.55 45.0 2.81e-01 91.9% 82.4%
1sr9A02 3.30.160.270 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Alpha-isopropylmalate synthase LeuA, regulatory domain 0.54 41.0 3.05e-01 82.3% 99.4%
2it1A02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 37.0 3.73e-01 75.8% 90.5%
2vo9A01 3.30.1380.10 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › 0.53 40.0 3.23e-01 85.5% 90.2%
2el8A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.52 42.0 3.77e-01 91.9% 63.7%
2bcqA04 3.30.210.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 3 › DNA polymerase, thumb domain 0.52 36.0 3.54e-01 71.0% 82.1%
2w5qA01 3.30.1120.170 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.52 31.0 2.81e-01 75.8% 39.8%
4lvnA00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.51 42.0 2.73e-01 98.4% 98.5%
7zhgO01 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.51 38.0 3.77e-01 82.3% 81.8%
5ekcF01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.51 41.0 2.73e-01 93.5% 80.5%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4094681 381.1.1.1 ↗ few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › BIR 0.79 71.0 5.04e-01 100.0% 38.0%
3931141 381.1.1.0 ↗ few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat 0.78 62.0 6.42e-01 100.0% 91.4%
3220527 381.1.1.1 ↗ few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › BIR 0.75 67.0 5.26e-01 100.0% 54.7%
3390801 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.72 56.0 4.63e-01 85.5% 52.7%
3559152 386.1.1.299 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF30478 0.70 50.0 5.48e-01 77.4% 94.0%
3406467 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.69 44.0 4.95e-01 72.6% 91.1%
3860365 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.69 43.0 4.78e-01 72.6% 86.7%
3535885 386.1.1.226 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Znf-C2H2_ZNF142 0.69 40.0 4.81e-01 96.8% 100.0%
3844188 386.1.1.289 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF30903 0.67 45.0 4.60e-01 77.4% 71.7%
3927826 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.67 39.0 4.51e-01 93.5% 100.0%
3993411 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.67 47.0 4.77e-01 83.9% 76.7%
3930599 386.1.1.4 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.66 47.0 4.69e-01 75.8% 82.8%
3623330 386.1.1.24 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_4 0.66 42.0 4.34e-01 77.4% 68.3%
3410836 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.65 45.0 4.70e-01 72.6% 92.7%
3537939 386.1.1.316 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF30902 0.65 44.0 4.97e-01 95.2% 97.8%
3765582 386.1.1.289 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF30903 0.65 44.0 4.09e-01 77.4% 55.0%
3523495 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.65 42.0 3.94e-01 100.0% 52.5%
3390398 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.65 47.0 3.68e-01 79.0% 60.9%
3894682 386.1.1.242 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_16 0.63 42.0 4.04e-01 74.2% 60.0%
3299616 64.1.1.1 ↗ beta meanders › WW domain-like › WW domain › WW domain › WW 0.63 36.0 4.28e-01 80.6% 87.5%
3720304 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.63 43.0 4.67e-01 72.6% 96.0%
3236762 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.63 41.0 3.91e-01 72.6% 56.0%
3475436 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.62 42.0 4.04e-01 72.6% 61.4%
3621229 386.1.1.4 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.62 43.0 4.18e-01 77.4% 65.7%
3477115 386.1.1.4 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.62 44.0 4.47e-01 75.8% 93.3%
3484622 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.62 41.0 3.79e-01 74.2% 52.5%
3245636 386.1.1.4 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.62 43.0 4.47e-01 74.2% 87.3%
3404541 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.61 38.0 4.20e-01 74.2% 84.4%
3995609 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.60 42.0 4.32e-01 74.2% 76.7%
3755589 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.60 43.0 3.68e-01 74.2% 67.0%
4146058 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.60 38.0 2.99e-01 100.0% 28.6%
3416658 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.60 46.0 4.51e-01 90.3% 77.1%
3572853 386.1.1.298 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_2nd_ZNF462 0.60 38.0 4.20e-01 74.2% 88.9%
3363052 386.1.1.207 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED_2 0.59 43.0 4.25e-01 77.4% 84.6%
3671003 386.1.1.4 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.59 47.0 4.82e-01 91.9% 95.0%
3464575 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.59 49.0 4.30e-01 100.0% 71.0%
4211411 386.1.1.231 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF2709 0.58 40.0 3.52e-01 72.6% 50.5%
3743048 633.1.1.1 ↗ alpha bundles › Bromodomain-like › Bromodomain › Bromodomain › Bromodomain 0.57 39.0 2.94e-01 71.0% 50.9%
3328886 64.1.1.1 ↗ beta meanders › WW domain-like › WW domain › WW domain › WW 0.57 37.0 3.92e-01 77.4% 74.5%
3406704 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.57 36.0 3.85e-01 71.0% 80.0%
3479347 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.57 37.0 3.96e-01 74.2% 84.0%
3264997 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.57 40.0 4.15e-01 74.2% 83.6%
4928885 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 34.0 3.83e-01 74.2% 84.4%
4065558 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.56 38.0 2.99e-01 72.6% 32.2%
4177587 3018.1.1.0 ↗ a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like 0.55 37.0 3.46e-01 71.0% 73.8%
4990476 386.1.1.24 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_4 0.54 40.0 3.67e-01 100.0% 58.8%
3849750 386.1.1.133 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2+zf-C2H2_4 0.54 38.0 4.03e-01 100.0% 87.3%
3621574 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.53 41.0 4.28e-01 100.0% 94.5%
4929700 529.1.1.0 ↗ few secondary structure elements › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) 0.53 36.0 3.20e-01 71.0% 90.0%
3594958 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.52 39.0 2.74e-01 85.5% 62.1%
D2 medium residues 84-147
PDB
Domain cluster: rep: iap-3__YP_008378255__Hemileuca_sp._nucleopolyhedrovirus__1367203__D5-88
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00653.28 best BIR 37.9 2.90e-09 93.8% 84.3%