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ie-0
Euk-VirSucra_jujuba_nucleopolyhedrovirus
ie-0__YP_009186708__Sucra_jujuba_nucleopolyhedrovirus__1563660
Identity
- Accession:
- YP_009186708 ↗
- Protein ID:
- ie-0
- Kingdom:
- euk
Quality
81.8
mean pLDDT
Taxonomy
TaxID: 1563660
Cluster
View cluster (29 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-191
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05290.18 best | Baculo_IE-1 | 48.6 | 1.20e-12 | 41.5% | 46.1% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8fbnB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.68 | 42.0 | 3.83e-01 | 87.7% | 46.8% |
| 1rv2D04 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.63 | 27.0 | 4.10e-01 | 87.7% | 97.1% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 37.0 | 3.62e-01 | 77.8% | 53.8% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.61 | 30.0 | 4.24e-01 | 85.4% | 93.3% |
| 6z0fA02 | 1.25.40.680 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain | 0.61 | 34.0 | 3.49e-01 | 72.5% | 54.2% |
| 5jj6B01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 28.0 | 3.56e-01 | 84.2% | 79.2% |
| 2pfdA03 | 1.20.120.680 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle | 0.57 | 46.0 | 4.36e-01 | 85.4% | 84.2% |
| 1sr2A00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.54 | 28.0 | 3.32e-01 | 73.7% | 71.6% |
| 7csoA01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.54 | 44.0 | 4.01e-01 | 85.4% | 79.5% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.52 | 36.0 | 4.18e-01 | 93.0% | 100.0% |
| 1t98A02 | 1.20.58.590 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain | 0.50 | 42.0 | 4.28e-01 | 88.3% | 100.0% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5067411 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.71 | 38.0 | 4.38e-01 | 80.7% | 70.4% |
| 3721366 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.63 | 52.0 | 3.87e-01 | 86.5% | 82.4% |
| 3695720 | 3861.1.1.2 ↗ | alpha bundles › Mitochondrial translocator protein (TSPO) › Mitochondrial translocator protein (TSPO) › Mitochondrial translocator protein (TSPO) › DUF1774 | 0.63 | 44.0 | 3.86e-01 | 84.8% | 47.8% |
| 3169342 | 109.4.1.381 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Rrn11 | 0.62 | 44.0 | 4.02e-01 | 84.2% | 55.1% |
| 3625019 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 43.0 | 4.16e-01 | 88.3% | 63.1% |
| 3217600 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 42.0 | 3.04e-01 | 70.2% | 38.9% |
| 3192400 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.60 | 52.0 | 3.79e-01 | 90.6% | 68.5% |
| 2060764 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.60 | 43.0 | 4.89e-01 | 86.0% | 99.2% |
| 3727620 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 45.0 | 4.38e-01 | 77.2% | 96.8% |
| 3410814 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.56 | 40.0 | 4.64e-01 | 94.2% | 100.0% |
| 3764055 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 41.0 | 3.32e-01 | 74.9% | 86.2% |
| 4819667 | 109.4.1.359 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exo70_C | 0.55 | 46.0 | 3.83e-01 | 87.7% | 64.4% |
| 3599864 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 43.0 | 3.35e-01 | 83.6% | 80.3% |
| 3738901 | 109.10.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Translin › Translin › Translin | 0.55 | 41.0 | 3.77e-01 | 81.3% | 60.5% |
| 3669902 | 109.4.1.504 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ndc1_Nup | 0.55 | 43.0 | 3.76e-01 | 85.4% | 54.6% |
| 3172321 | 603.1.1.144 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Ndc1_Nup | 0.54 | 40.0 | 3.83e-01 | 84.8% | 63.9% |
| 3651297 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 43.0 | 3.58e-01 | 82.5% | 49.7% |
| 4015003 | 109.10.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Translin › Translin | 0.54 | 43.0 | 3.86e-01 | 83.6% | 77.4% |
| 3317291 | 601.1.1.63 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Glyco_hydro81C | 0.54 | 37.0 | 3.97e-01 | 86.0% | 80.0% |
| 3263613 | 601.1.1.97 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › DNA_repr_REX1B | 0.54 | 36.0 | 3.77e-01 | 75.4% | 74.2% |
| 3405706 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.54 | 39.0 | 4.48e-01 | 94.2% | 100.0% |
| 143030 | 109.10.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Translin › Translin › Translin | 0.53 | 42.0 | 3.90e-01 | 84.2% | 77.8% |
| 3289954 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.52 | 42.0 | 3.42e-01 | 87.7% | 75.4% |
| 3995514 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.52 | 42.0 | 4.59e-01 | 95.9% | 100.0% |
| 3183105 | 109.10.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Translin › Translin › Translin | 0.52 | 43.0 | 3.83e-01 | 86.5% | 80.0% |
| 4981171 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.52 | 32.0 | 3.17e-01 | 89.5% | 59.4% |
| 3887645 | 633.21.1.10 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › MARVEL | 0.51 | 37.0 | 4.23e-01 | 95.3% | 99.2% |
| 4206339 | 109.4.1.1259 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_PBS, HEAT_2 | 0.50 | 38.0 | 3.37e-01 | 78.4% | 62.0% |
| 3251844 | 601.1.3.6 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › A middle domain of Talin 1 › Talin_IBS2B | 0.50 | 31.0 | 3.20e-01 | 73.1% | 62.4% |
D2
medium
residues 199-255
Domain cluster:
rep: IE-0__YP_008378369__Choristoneura_rosaceana_nucleopolyhedrovirus__58094__D186-240
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05290.18 best | Baculo_IE-1 | 106.6 | 1.50e-30 | 100.0% | 39.7% |