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ie-1
Euk-VirLambdina_fiscellaria_nucleopolyhedrovirus
ie-1__YP_009133342__Lambdina_fiscellaria_nucleopolyhedrovirus__1642929
Identity
- Accession:
- YP_009133342 ↗
- Protein ID:
- ie-1
- Kingdom:
- euk
Quality
64.8
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Lambdina_fiscellaria_nucleopolyhedrovirus
TaxID: 1642929
Cluster
View cluster (14 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 259-411
Domain cluster:
rep: IE-1__YP_009330138__Plodia_interpunctella_granulovirus__262175__D62-179
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03430.21 best | TATR | 183.0 | 1.40e-53 | 100.0% | 35.0% |
D2
high
residues 457-646
Domain cluster:
rep: IE-1__YP_009552572__Operophtera_brumata_nucleopolyhedrovirus__1046267__D273-305_322-485
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03430.21 best | TATR | 225.1 | 2.40e-66 | 97.4% | 39.5% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6upsA01 | 3.40.395.10 | Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A | 0.64 | 46.0 | 5.07e-01 | 74.7% | 92.3% |
| 2l3tA02 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.58 | 32.0 | 4.18e-01 | 70.0% | 99.0% |
| 1d4tA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.55 | 29.0 | 3.77e-01 | 77.4% | 91.3% |
| 3k7eB00 | 3.40.50.1460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 42.0 | 4.16e-01 | 78.9% | 78.0% |
| 1iftA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.52 | 36.0 | 3.79e-01 | 70.0% | 89.7% |
| 2zyzC00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.51 | 24.0 | 3.24e-01 | 78.9% | 85.4% |
| 3ktzA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.51 | 36.0 | 3.76e-01 | 70.5% | 88.1% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3660659 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.61 | 47.0 | 4.27e-01 | 79.5% | 86.0% |
| 4958522 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.59 | 22.0 | 3.63e-01 | 78.4% | 95.4% |
| 3967405 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.59 | 15.0 | 2.74e-01 | 90.5% | 66.7% |
| 3596952 | 7575.1.1.0 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like | 0.58 | 45.0 | 3.81e-01 | 78.9% | 60.4% |
| 3715195 | 2007.2.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like | 0.58 | 44.0 | 4.03e-01 | 78.4% | 91.3% |
| 4106397 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.57 | 25.0 | 3.78e-01 | 70.0% | 100.0% |
| 5014257 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.57 | 24.0 | 2.40e-01 | 78.4% | 34.9% |
| 3379702 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.55 | 17.0 | 2.73e-01 | 95.8% | 70.8% |
| 3965422 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 25.0 | 3.45e-01 | 83.7% | 85.3% |
| 3497311 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.54 | 39.0 | 3.24e-01 | 73.2% | 56.8% |
| 3416006 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.53 | 45.0 | 4.28e-01 | 91.6% | 91.7% |
| 4961034 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.53 | 28.0 | 3.59e-01 | 78.4% | 87.3% |
| 3549045 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.53 | 28.0 | 3.44e-01 | 82.6% | 82.7% |
| 74344 | 292.1.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Ribosome inactivating proteins (RIP) › Ribosome inactivating proteins (RIP) › RIP | 0.51 | 36.0 | 3.28e-01 | 72.1% | 61.3% |