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inner_capsid_protein
Euk-VirHuman_rotavirus_B
inner_capsid_protein__YP_008126846__Human_rotavirus_B__10942
Identity
- Accession:
- YP_008126846 ↗
- Protein ID:
- inner_capsid_protein
- Kingdom:
- euk
Quality
71.5
mean pLDDT
Taxonomy
Orthornavirae›
Duplornaviricota›
Resentoviricetes›
Reovirales›
Sedoreoviridae›
Rotavirus›
Human_rotavirus_B
TaxID: 10942
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-124
Domain cluster:
rep: VP6__YP_009130678__Rotavirus_I__1637496__D3-124
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25657.2 best | Rota_VP6 | 228.0 | 2.60e-67 | 100.0% | 31.8% |
D2
high
residues 150-331
Domain cluster:
rep: major_inner_capsid_protein__YP_392512__Rotavirus_C__36427__D161-330
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25657.2 best | Rota_VP6 | 260.8 | 2.80e-77 | 100.0% | 46.4% |
D3
high
residues 334-390