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isomerase_motif_protein
Euk-VirRanid_herpesvirus_3
isomerase_motif_protein__YP_009362317__Ranid_herpesvirus_3__1987509
Identity
- Accession:
- YP_009362317 ↗
- Protein ID:
- isomerase_motif_protein
- Kingdom:
- euk
Quality
52.5
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Alloherpesviridae›
Batravirus›
Ranid_herpesvirus_3
TaxID: 1987509
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-169
D2
high
residues 187-355
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oq1A03 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.58 | 32.0 | 4.07e-01 | 78.7% | 90.0% |
| 1d4tA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.58 | 33.0 | 4.09e-01 | 78.1% | 90.4% |
| 1i3zA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.56 | 32.0 | 3.98e-01 | 78.7% | 90.3% |
| 2kt4B01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 34.0 | 3.70e-01 | 85.8% | 71.8% |
| 1qftB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 38.0 | 3.90e-01 | 77.5% | 70.4% |
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.55 | 39.0 | 3.89e-01 | 79.3% | 70.1% |
| 1in0A02 | 3.30.70.990 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YajQ-like, domain 2 | 0.53 | 23.0 | 3.02e-01 | 76.3% | 71.7% |
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 26.0 | 3.35e-01 | 75.7% | 80.6% |
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 36.0 | 3.87e-01 | 78.7% | 83.0% |
| 3hdjA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.51 | 29.0 | 3.15e-01 | 83.4% | 65.0% |
| 1ospO01 | 2.40.128.160 | Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) | 0.50 | 31.0 | 3.82e-01 | 84.6% | 100.0% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3304041 | 3012.1.1.1 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase | 0.64 | 26.0 | 3.62e-01 | 94.1% | 76.2% |
| 3755862 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.61 | 31.0 | 4.05e-01 | 78.1% | 86.3% |
| 4602126 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.57 | 33.0 | 3.98e-01 | 78.1% | 85.5% |
| 4671100 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.54 | 34.0 | 3.57e-01 | 76.9% | 68.4% |