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js4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00023
Bact-Virjs4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00023
Identity
- Kingdom:
- phage
Quality
91.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-51
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2o7tA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.75 | 55.0 | 3.77e-01 | 80.4% | 62.7% |
| 3ndhA00 | 3.40.600.30 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › | 0.60 | 44.0 | 3.03e-01 | 84.3% | 32.7% |
| 3k9dA02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.59 | 42.0 | 2.91e-01 | 78.4% | 29.7% |
| 1wteB01 | 1.10.3250.10 | Mainly Alpha › Orthogonal Bundle › type ii restriction endonuclease, domain 1 › type ii restriction endonuclease, domain 1 | 0.57 | 40.0 | 2.94e-01 | 76.5% | 82.3% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3403625 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 52.0 | 4.88e-01 | 70.6% | 96.7% |
| 3729428 | 101.1.2.60 ↗ | alpha arrays › HTH › HTH › winged helix domain › HA2_N | 0.75 | 52.0 | 4.75e-01 | 72.5% | 90.8% |
| 5025904 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.75 | 48.0 | 4.25e-01 | 70.6% | 47.1% |
| 3887950 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 50.0 | 4.69e-01 | 70.6% | 96.7% |
| 3204423 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 51.0 | 4.85e-01 | 74.5% | 96.7% |
| 3467707 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 52.0 | 3.29e-01 | 82.4% | 24.8% |
| 5081088 | 101.1.2.932 ↗ | alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc | 0.66 | 50.0 | 4.17e-01 | 80.4% | 71.1% |
| 4247702 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 51.0 | 3.11e-01 | 82.4% | 61.0% |
| 3928622 | 4156.1.1.11 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_N | 0.65 | 52.0 | 3.51e-01 | 86.3% | 93.3% |
| 3565654 | 101.1.2.460 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_DDX60 | 0.64 | 49.0 | 3.70e-01 | 82.4% | 80.0% |
| 3940059 | 4156.1.1.3 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › DSHCT | 0.62 | 53.0 | 3.42e-01 | 88.2% | 39.5% |
| 5002796 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 50.0 | 4.56e-01 | 86.3% | 90.8% |
| 5057140 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 49.0 | 4.64e-01 | 84.3% | 90.0% |