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js4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00034
Bact-Virjs4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00034
Identity
- Kingdom:
- phage
Quality
78.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-165
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3holA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.57 | 42.0 | 4.20e-01 | 74.8% | 96.4% |
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.54 | 39.0 | 3.80e-01 | 73.6% | 88.7% |
| 1xf8A02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 36.0 | 3.66e-01 | 71.8% | 77.0% |
| 1nslA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 37.0 | 3.63e-01 | 77.3% | 69.9% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3802306 | 284.1.2.0 ↗ | a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases | 0.63 | 37.0 | 4.73e-01 | 78.5% | 100.0% |
| 3396540 | 331.3.1.20 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C | 0.62 | 46.0 | 4.10e-01 | 76.1% | 74.8% |
| 3812869 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.62 | 38.0 | 4.73e-01 | 74.2% | 100.0% |
| 3912697 | 292.2.1.3 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Plk4_PB2 | 0.60 | 38.0 | 4.50e-01 | 93.9% | 93.6% |
| 3318685 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.59 | 38.0 | 4.62e-01 | 79.1% | 99.0% |
| 3418904 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.56 | 35.0 | 4.31e-01 | 73.6% | 100.0% |
| 3367547 | 844.1.1.4 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase | 0.56 | 42.0 | 3.97e-01 | 77.9% | 86.1% |
| 3725417 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.56 | 44.0 | 4.45e-01 | 81.6% | 92.5% |
| 3707133 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.55 | 38.0 | 3.52e-01 | 70.6% | 89.0% |
| 5038572 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.55 | 45.0 | 4.67e-01 | 85.9% | 95.3% |
| 3277839 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.55 | 39.0 | 4.09e-01 | 73.6% | 94.7% |
| 3427945 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.55 | 34.0 | 4.18e-01 | 73.0% | 100.0% |
| 3192981 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.54 | 43.0 | 4.37e-01 | 81.6% | 92.5% |
| 3624211 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.54 | 38.0 | 3.86e-01 | 72.4% | 94.5% |
| 2549340 | 3735.1.1.5 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › TTc_toxin_rep | 0.53 | 42.0 | 2.77e-01 | 84.0% | 66.4% |
| 4324615 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.52 | 39.0 | 4.00e-01 | 76.1% | 91.6% |
| 3188851 | 9.14.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › HRI1 | 0.52 | 34.0 | 4.04e-01 | 81.6% | 97.3% |
| 4957722 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.52 | 35.0 | 3.80e-01 | 84.7% | 79.7% |
| 3886275 | 331.3.1.4 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › IP_trans | 0.52 | 44.0 | 3.99e-01 | 93.3% | 95.2% |
| 4203573 | 213.1.1.75 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FemAB, Acetyltransf_6 | 0.52 | 36.0 | 3.61e-01 | 71.8% | 74.7% |
| 3579468 | 71.1.1.21 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25897 | 0.51 | 40.0 | 3.55e-01 | 81.6% | 86.5% |
| 3482064 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.51 | 42.0 | 4.26e-01 | 89.6% | 97.5% |
| 4095676 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.50 | 44.0 | 4.31e-01 | 100.0% | 86.3% |