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js4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00148
Bact-Virjs4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00148
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 63-262
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04203.19 best | Sortase | 28.3 | 1.90e-06 | 87.0% | 99.2% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5jcvA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.92 | 77.0 | 8.29e-01 | 92.0% | 98.3% |
| 1ng5B00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.92 | 80.0 | 7.93e-01 | 95.0% | 86.4% |
| 4ux7A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.91 | 79.0 | 7.90e-01 | 94.0% | 87.3% |
| 3psqB00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.90 | 78.0 | 8.16e-01 | 94.0% | 97.3% |
| 4y4qA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.89 | 74.0 | 7.99e-01 | 95.5% | 98.9% |
| 2kw8A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.83 | 55.0 | 6.19e-01 | 92.5% | 84.2% |
| 3fn5B00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.81 | 56.0 | 6.23e-01 | 94.0% | 85.9% |
| 1t2pA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.77 | 54.0 | 6.35e-01 | 92.5% | 97.2% |
| 4d70A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.76 | 56.0 | 6.32e-01 | 94.5% | 93.8% |
| 2ln7A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.76 | 52.0 | 6.01e-01 | 93.0% | 93.2% |
| 2w1kA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.64 | 57.0 | 5.65e-01 | 95.5% | 88.5% |
| 2w1jA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.63 | 57.0 | 5.84e-01 | 95.5% | 96.9% |
| 5k9aA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.61 | 57.0 | 5.54e-01 | 96.5% | 90.7% |
| 3kmuA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 26.0 | 3.76e-01 | 88.0% | 93.1% |
| 3r5lA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 32.0 | 4.02e-01 | 90.0% | 94.8% |
| 2vqeC02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.54 | 28.0 | 3.85e-01 | 88.0% | 100.0% |
| 4hh2B03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 25.0 | 3.41e-01 | 80.5% | 93.0% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2129791 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.95 | 85.0 | 8.31e-01 | 95.0% | 86.3% |
| 1942280 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.93 | 75.0 | 7.86e-01 | 93.5% | 89.6% |
| 1824763 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.92 | 77.0 | 8.29e-01 | 92.0% | 98.3% |
| 811 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.91 | 82.0 | 7.65e-01 | 95.5% | 78.3% |
| 1569000 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.89 | 74.0 | 7.99e-01 | 95.5% | 98.9% |
| 142114 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.88 | 78.0 | 8.11e-01 | 94.0% | 97.3% |
| 3587540 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.80 | 57.0 | 6.32e-01 | 91.5% | 88.3% |
| 428579 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.79 | 52.0 | 6.22e-01 | 94.0% | 96.4% |
| 4868829 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.79 | 49.0 | 6.21e-01 | 86.0% | 100.0% |
| 153599 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.76 | 52.0 | 6.01e-01 | 93.0% | 93.2% |
| 3589952 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.75 | 58.0 | 6.10e-01 | 97.0% | 86.5% |
| 4187781 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.69 | 58.0 | 5.64e-01 | 95.5% | 80.5% |
| 2832652 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.63 | 57.0 | 5.90e-01 | 96.5% | 98.4% |
| 4008366 | 812.1.1.0 ↗ | a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain | 0.63 | 28.0 | 4.06e-01 | 71.0% | 91.1% |
| 2775426 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.63 | 55.0 | 5.61e-01 | 97.5% | 92.4% |
| 154269 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.63 | 58.0 | 5.79e-01 | 99.0% | 94.6% |
| 3587062 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.63 | 57.0 | 5.51e-01 | 95.5% | 85.8% |
| 2046344 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.62 | 57.0 | 5.68e-01 | 97.0% | 94.7% |
| 1842342 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.61 | 57.0 | 5.54e-01 | 96.5% | 90.7% |
| 3322115 | 230.2.1.1 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C | 0.54 | 30.0 | 3.81e-01 | 88.5% | 92.2% |
| 4832865 | 230.2.1.1 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C | 0.52 | 29.0 | 3.53e-01 | 89.0% | 83.2% |
| 4997576 | 223.1.1.27 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_10 | 0.51 | 22.0 | 2.83e-01 | 83.0% | 68.2% |
D2
medium
residues 1-54
Domain cluster:
representative