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js4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00163
Bact-Virjs4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00163
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 37-166
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6jebA01 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.68 | 40.0 | 5.02e-01 | 97.7% | 100.0% |
| 2epkX01 | 3.30.160.230 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › N-acetyl-beta-d-glucosaminidase | 0.67 | 36.0 | 4.38e-01 | 72.3% | 82.5% |
| 2ljpA00 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.64 | 33.0 | 3.49e-01 | 100.0% | 53.8% |
| 4pysA01 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.58 | 48.0 | 5.03e-01 | 100.0% | 95.0% |
| 7cboA01 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.57 | 45.0 | 4.90e-01 | 97.7% | 100.0% |
| 5bxrA01 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.57 | 48.0 | 4.72e-01 | 99.2% | 86.1% |
| 1c7sA02 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.56 | 47.0 | 4.75e-01 | 100.0% | 90.6% |
| 3q71A00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.55 | 39.0 | 3.37e-01 | 71.5% | 84.2% |
| 2cxxA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 36.0 | 3.18e-01 | 96.2% | 47.3% |
| 3wgtA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 40.0 | 3.52e-01 | 80.0% | 99.5% |
| 2braA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 43.0 | 2.98e-01 | 88.5% | 75.5% |
| 6yhhA01 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.53 | 48.0 | 4.75e-01 | 99.2% | 94.2% |
| 3tqfA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 37.0 | 3.50e-01 | 74.6% | 90.3% |
| 4okoA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.52 | 40.0 | 3.05e-01 | 80.0% | 74.8% |
| 3rcnA01 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.52 | 45.0 | 4.51e-01 | 100.0% | 93.9% |
| 6ks6B02 | 3.30.260.10 | Alpha Beta › 2-Layer Sandwich › GROEL; domain 2 › TCP-1-like chaperonin intermediate domain | 0.52 | 36.0 | 3.76e-01 | 93.1% | 77.0% |
| 1ac5A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 40.0 | 2.75e-01 | 84.6% | 86.5% |
| 1ivyB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 39.0 | 2.70e-01 | 81.5% | 89.8% |
| 6pv5A01 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.50 | 44.0 | 4.43e-01 | 100.0% | 95.3% |
| 2mjlA00 | 3.40.50.1470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidyl-tRNA hydrolase | 0.50 | 43.0 | 3.79e-01 | 94.6% | 100.0% |
| 3cvzB01 | 3.30.1490.290 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Low molecular weight S-layer protein, domain 1 | 0.50 | 30.0 | 3.44e-01 | 93.1% | 78.8% |
| 8bdpA01 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.50 | 44.0 | 4.56e-01 | 96.9% | 100.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3290645 | 2498.1.1.29 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 | 0.75 | 47.0 | 4.91e-01 | 77.7% | 68.3% |
| 5083216 | 2498.1.1.29 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 | 0.62 | 57.0 | 5.07e-01 | 99.2% | 81.1% |
| 3397015 | 223.2.1.33 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 | 0.60 | 41.0 | 4.03e-01 | 70.0% | 84.3% |
| 4955694 | 2498.2.1.0 ↗ | mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain | 0.56 | 39.0 | 4.02e-01 | 71.5% | 100.0% |
| 4460231 | 7579.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S10 | 0.52 | 38.0 | 2.63e-01 | 75.4% | 90.0% |
| 5078622 | 2007.1.1.42 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › IFT52_GIFT | 0.51 | 35.0 | 2.95e-01 | 70.8% | 98.7% |
D2
medium
residues 167-224
Domain cluster:
representative
CATH (61)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ulyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 56.0 | 4.77e-01 | 70.7% | 43.8% |
| 1u2wD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 56.0 | 4.68e-01 | 70.7% | 42.6% |
| 3gw2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 54.0 | 4.59e-01 | 70.7% | 41.9% |
| 1r1uB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 54.0 | 4.58e-01 | 70.7% | 41.9% |
| 2ethA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 55.0 | 4.03e-01 | 70.7% | 28.4% |
| 2cfxA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 56.0 | 5.97e-01 | 70.7% | 82.0% |
| 1j5yA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 58.0 | 5.66e-01 | 75.9% | 70.3% |
| 4kmfA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 56.0 | 5.51e-01 | 75.9% | 69.4% |
| 3r0aA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 54.0 | 4.22e-01 | 72.4% | 35.8% |
| 2jt1A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 52.0 | 4.87e-01 | 70.7% | 64.8% |
| 3g3zA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 52.0 | 5.05e-01 | 70.7% | 64.1% |
| 2k9lA00 | 1.10.10.1330 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain | 0.76 | 56.0 | 5.06e-01 | 77.6% | 60.5% |
| 6az6A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 53.0 | 4.89e-01 | 74.1% | 64.0% |
| 3e6mA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 50.0 | 3.72e-01 | 70.7% | 27.4% |
| 1hw1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 54.0 | 4.95e-01 | 75.9% | 66.7% |
| 2di3A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 52.0 | 4.77e-01 | 72.4% | 68.0% |
| 3oopA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 50.0 | 3.77e-01 | 70.7% | 29.9% |
| 1z05A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 53.0 | 4.93e-01 | 82.8% | 61.1% |
| 2r3sB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 52.0 | 4.66e-01 | 77.6% | 53.1% |
| 1k78A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 52.0 | 4.97e-01 | 81.0% | 65.2% |
| 3r4kB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 52.0 | 5.06e-01 | 75.9% | 68.3% |
| 5fgmA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 48.0 | 4.61e-01 | 70.7% | 60.0% |
| 3f8mA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 52.0 | 5.05e-01 | 75.9% | 72.3% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 54.0 | 5.17e-01 | 82.8% | 68.7% |
| 2gauA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 51.0 | 4.58e-01 | 74.1% | 65.4% |
| 2xubA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 48.0 | 4.39e-01 | 70.7% | 51.3% |
| 3edpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 54.0 | 4.98e-01 | 81.0% | 64.5% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 46.0 | 4.26e-01 | 70.7% | 50.0% |
| 4h0eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 52.0 | 4.92e-01 | 77.6% | 71.4% |
| 4i2oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 50.0 | 4.53e-01 | 74.1% | 62.5% |
| 2dk5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 49.0 | 4.73e-01 | 75.9% | 63.6% |
| 1gdtB03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 50.0 | 5.49e-01 | 87.9% | 95.6% |
| 4ivnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 51.0 | 4.73e-01 | 77.6% | 69.7% |
| 3py8A04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.71 | 48.0 | 3.55e-01 | 70.7% | 36.8% |
| 1r71A01 | 1.10.10.730 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain | 0.70 | 47.0 | 4.80e-01 | 74.1% | 73.2% |
| 3f2gA00 | 3.30.450.410 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.70 | 51.0 | 3.50e-01 | 79.3% | 23.4% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.69 | 49.0 | 4.13e-01 | 77.6% | 46.6% |
| 3by6C01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 52.0 | 4.71e-01 | 81.0% | 67.5% |
| 3ecoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 48.0 | 3.75e-01 | 75.9% | 40.3% |
| 2r0qC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 55.0 | 5.60e-01 | 89.7% | 98.2% |
| 5cvrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 47.0 | 4.20e-01 | 74.1% | 71.4% |
| 2o3fA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 48.0 | 4.36e-01 | 77.6% | 64.6% |
| 2hyjA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 46.0 | 4.98e-01 | 72.4% | 100.0% |
| 2dt5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 50.0 | 4.62e-01 | 81.0% | 71.2% |
| 2llkA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 43.0 | 4.80e-01 | 70.7% | 97.6% |
| 1x1aA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 54.0 | 3.91e-01 | 94.8% | 43.5% |
| 4tv7D01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 49.0 | 4.35e-01 | 81.0% | 62.4% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.65 | 49.0 | 4.22e-01 | 82.8% | 51.1% |
| 7cluA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 52.0 | 4.59e-01 | 91.4% | 65.2% |
| 3gwzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 52.0 | 4.61e-01 | 93.1% | 83.1% |
| 5c17A00 | 3.30.450.410 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.64 | 48.0 | 3.34e-01 | 82.8% | 25.2% |
| 3cdlA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.64 | 47.0 | 4.84e-01 | 81.0% | 100.0% |
| 3lstA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 52.0 | 4.63e-01 | 94.8% | 72.1% |
| 4krdB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.63 | 47.0 | 3.37e-01 | 82.8% | 55.8% |
| 2rasA01 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 47.0 | 3.39e-01 | 86.2% | 29.8% |
| 1l0oC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 46.0 | 4.63e-01 | 86.2% | 91.2% |
| 2h09A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 46.0 | 4.37e-01 | 87.9% | 85.9% |
| 1dulA00 | 1.10.260.30 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › Signal recognition particle, SRP54 subunit, M-domain | 0.58 | 44.0 | 4.30e-01 | 86.2% | 75.0% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.51 | 40.0 | 3.26e-01 | 89.7% | 68.6% |
| 4qxbB00 | 6.10.280.250 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 37.0 | 3.55e-01 | 87.9% | 66.2% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 34.0 | 3.26e-01 | 74.1% | 96.0% |
ECOD (71)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3971106 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.89 | 58.0 | 4.72e-01 | 70.7% | 39.0% |
| 5022508 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.88 | 57.0 | 4.76e-01 | 70.7% | 41.1% |
| 5050065 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.88 | 57.0 | 4.76e-01 | 70.7% | 41.1% |
| 4943644 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.88 | 57.0 | 4.23e-01 | 70.7% | 28.9% |
| 5027272 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.87 | 57.0 | 4.81e-01 | 70.7% | 43.3% |
| 4958066 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.86 | 56.0 | 4.52e-01 | 70.7% | 37.1% |
| 5017324 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.86 | 56.0 | 4.43e-01 | 70.7% | 35.8% |
| 5012627 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.82 | 54.0 | 4.35e-01 | 70.7% | 37.1% |
| 4962036 | 101.1.2.934 ↗ | alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N | 0.81 | 53.0 | 4.42e-01 | 70.7% | 41.1% |
| 4367442 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 57.0 | 4.20e-01 | 75.9% | 35.0% |
| 4985497 | 101.1.2.922 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7123 | 0.78 | 53.0 | 4.65e-01 | 70.7% | 52.9% |
| 4988046 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 54.0 | 5.78e-01 | 75.9% | 94.0% |
| 3739047 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.76 | 54.0 | 5.00e-01 | 75.9% | 62.7% |
| 5031872 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 61.0 | 6.06e-01 | 96.6% | 85.0% |
| 3948820 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.75 | 51.0 | 4.35e-01 | 70.7% | 51.1% |
| 4971705 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 52.0 | 4.82e-01 | 77.6% | 57.3% |
| 3284500 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.74 | 57.0 | 5.13e-01 | 82.8% | 63.7% |
| 5046275 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 52.0 | 5.33e-01 | 75.9% | 78.2% |
| 4086835 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.74 | 53.0 | 4.76e-01 | 75.9% | 61.3% |
| 4454324 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.74 | 60.0 | 4.96e-01 | 87.9% | 53.0% |
| 4097443 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.73 | 56.0 | 4.00e-01 | 82.8% | 32.9% |
| 4674817 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.73 | 56.0 | 3.95e-01 | 82.8% | 32.0% |
| None | — | 0.73 | 53.0 | 3.20e-01 | 75.9% | 14.0% | |
| 3929142 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 59.0 | 5.85e-01 | 89.7% | 85.0% |
| 5039663 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 47.0 | 4.29e-01 | 70.7% | 50.7% |
| 3280723 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.73 | 55.0 | 4.79e-01 | 82.8% | 56.7% |
| 5075195 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 47.0 | 3.81e-01 | 70.7% | 33.9% |
| 4025539 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.72 | 51.0 | 4.74e-01 | 75.9% | 65.3% |
| 3280481 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.72 | 62.0 | 5.67e-01 | 94.8% | 76.0% |
| 3589184 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 48.0 | 4.43e-01 | 74.1% | 53.3% |
| 5083086 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 56.0 | 5.81e-01 | 86.2% | 90.7% |
| 5036006 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 58.0 | 4.39e-01 | 87.9% | 39.3% |
| 3281935 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.72 | 59.0 | 5.44e-01 | 91.4% | 73.3% |
| 3280166 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.72 | 51.0 | 5.08e-01 | 75.9% | 81.7% |
| 3933366 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.72 | 56.0 | 5.25e-01 | 86.2% | 70.0% |
| 3717763 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 56.0 | 5.28e-01 | 87.9% | 75.7% |
| 4032673 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 53.0 | 3.50e-01 | 82.8% | 21.2% |
| 4948128 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 55.0 | 5.30e-01 | 87.9% | 76.9% |
| 4442301 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 48.0 | 5.09e-01 | 74.1% | 94.0% |
| 3713798 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.69 | 50.0 | 4.40e-01 | 77.6% | 67.1% |
| 4339699 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.69 | 49.0 | 5.02e-01 | 75.9% | 89.1% |
| 3644937 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.69 | 52.0 | 3.81e-01 | 82.8% | 31.2% |
| 3429968 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.68 | 52.0 | 4.91e-01 | 82.8% | 72.9% |
| 4495608 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 49.0 | 5.15e-01 | 82.8% | 90.0% |
| 3664503 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.68 | 53.0 | 4.97e-01 | 84.5% | 92.9% |
| 3896790 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 49.0 | 4.57e-01 | 79.3% | 64.0% |
| 3350525 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.67 | 51.0 | 4.92e-01 | 82.8% | 75.4% |
| 3428775 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 51.0 | 3.18e-01 | 82.8% | 15.9% |
| 4391471 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.66 | 47.0 | 4.86e-01 | 75.9% | 89.1% |
| None | — | 0.65 | 49.0 | 3.28e-01 | 82.8% | 20.4% | |
| 133896 | 101.1.2.133 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_15 | 0.65 | 48.0 | 4.38e-01 | 82.8% | 58.7% |
| 4238054 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.65 | 49.0 | 3.28e-01 | 82.8% | 20.4% |
| 5056126 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 49.0 | 4.72e-01 | 87.9% | 87.1% |
| 4165105 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.64 | 51.0 | 4.63e-01 | 93.1% | 77.6% |
| 3284461 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 50.0 | 3.36e-01 | 89.7% | 20.8% |
| 3826046 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.63 | 47.0 | 3.54e-01 | 84.5% | 30.9% |
| 4160122 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.63 | 47.0 | 3.64e-01 | 87.9% | 33.3% |
| 3347305 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.63 | 47.0 | 3.50e-01 | 84.5% | 30.9% |
| 3727621 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 46.0 | 4.24e-01 | 82.8% | 65.0% |
| 4056597 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.62 | 46.0 | 3.00e-01 | 84.5% | 16.2% |
| 3728726 | 101.1.1.2 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC | 0.62 | 47.0 | 4.41e-01 | 86.2% | 72.0% |
| 4253265 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.62 | 47.0 | 3.44e-01 | 84.5% | 30.9% |
| 3980765 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 46.0 | 3.44e-01 | 84.5% | 30.9% |
| 4550123 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.61 | 46.0 | 4.62e-01 | 82.8% | 83.3% |
| 2439 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.61 | 46.0 | 4.63e-01 | 86.2% | 91.2% |
| 4331721 | 101.1.1.225 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF6262 | 0.61 | 47.0 | 4.54e-01 | 91.4% | 78.6% |
| 3288971 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.60 | 47.0 | 3.62e-01 | 89.7% | 34.7% |
| 4956833 | 101.1.1.19 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › SRP_SPB | 0.58 | 46.0 | 3.60e-01 | 91.4% | 40.0% |
| 3662896 | 101.1.1.411 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r2 | 0.58 | 42.0 | 3.47e-01 | 84.5% | 42.4% |
| 3299379 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.57 | 42.0 | 3.28e-01 | 84.5% | 36.0% |
| 3587898 | 101.1.2.214 ↗ | alpha arrays › HTH › HTH › winged helix domain › DnaD_N | 0.53 | 38.0 | 3.17e-01 | 82.8% | 57.5% |