←Back to structures

js4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00174

Bact-Vir

js4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00174

Identity

Kingdom:
phage

Quality

59.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 96-174
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6mfvC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 44.0 3.67e-01 100.0% 51.4%
2akjA02 3.30.413.10 Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 0.52 40.0 3.18e-01 86.1% 82.8%
7t85A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 42.0 3.44e-01 97.5% 83.2%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5007116 518.1.1.1 ↗ alpha arrays › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain › CheR_N 0.59 35.0 3.67e-01 82.3% 64.3%
3187902 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.52 43.0 3.82e-01 94.9% 92.5%
4082710 327.10.1.3 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N 0.51 29.0 3.05e-01 86.1% 57.3%
4109430 327.10.1.3 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N 0.51 30.0 3.05e-01 86.1% 57.3%